Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01353 ATGTCGCCAACGGGTCCCGCCGGAGAACCCACCCTCGGAGGCTCCTGTGCCCGCGCGGTGGTGGTGGGGGTGAAGATGGACTCCCCCAGCAAGGAATTGCTCACGTGGGCTTTGGTCAAAGTTGCTCACCCTGGTGACACCGTTGTTGCTCTGCATGTTCTTGGGAACCATGAAACTGTGAATGGAGACGATAAATCGTCGCTGCTTTCGCTTGTCAAGGCGTTTGACTCTGTTCTTACCGTTTACGAAGGATTCTGCAATTTGAAACAGATCGACCTCAAACTCAAAATTTGCCGTGGTTCTTCAGTGAAGAAAATTTTGGTTCGAGAAGCAAATGGTTATTCGGCTTCTTATGTTGTCGTTGGAACTACTCATGGTCGGCATAGAATCCGGTCATCTACCTTTGTTGCTAAATACTGTGCTAAAAGGTTGTCCAAGGATTGTTGTGTTCTCGCTGTTAACAATGGGAAAGTTGTGTTCAAGCGTGACAGCTCGCCGCCGAGTGTTGCTGACTTACAAGGGATTGATCGTCAACACAGAAATGGTTTGATCGGTTCGATTCACTGGACACTCAGTAAGAACACAAAAGTTCTAAGTGATGACAATTCAGGGACGGATGCTGATGGGAAGAAACCTGGCCATATTTCGGATCACAGTTTGGCTAAGTTTTTTCTGGATTCTACAGAAACTGTTAGAAAACCAAGCTGTTCAATTTGTGGCACAACCCTGGCATTGCCAGACCCTTCTTGCTACCAATCTGCAGAAGGGTTTTCTGGTGATGATGGTAAAGAAAATTCATTGGCTATAGTACCTGTGCAACCCACTGTTGCGGAGAAAATGGAATTGAAACCTGGTTGGCCACTACTACAACGTGGAATTTTATCGGAGACACAATCTGCTGATAGATCATTGATGCACCCCCAGATATCCGTGGTCCAGTGGGCAATGAGGTTACCTTGTAGAAATATTTCAAATGCTGCCGATCGTGATGAAAAGTCTGAAATTTGTGATCAAGGTCCAAATCAACCTGCGGCTTTAGATAGGGAAAGCGGTGCTCTAGTTCCAGTAGATTCTGAAATAGGGATAGCTTCTTCGCCAGAAGGCAATTCAAGAAACATTCCTAAACAATTGCAGGGCCTGCATGAGAAGTACTCGTCAACTTGCAGATTGTTTGAGTACCAAGAACTTGTATCTGCCACATCAAATTTCTTAGCGGAAAACTTTATTGGGAAAGGAGGAAGCAGTCAGGTTTATAGAGGCTGCCTTCCAGATGGCAAGGAACTTGCCGTCAAGATTCTAAAGCCATCTGAAGATGTATTGAAGGAATTTATTCTGGAAATAGAAATCATCACTACCTTGCATCACAAAAACATAATTTCCCTCCTGGGATTCTGCTTTGAGAATGGCAAATTTCTTCTGGTTTATGATCTCTTATCAAGAGGAAGCCTTGAAGAGAACCTTCACGGTAATAAGAAAAATTCACATGAGTTTGGTTGGTCCGAAAGATATAAGGTAGCAGTGGGTGTTGCTGAGGCTTTAGATTATCTGCATTCTAAAGATGATCAACCTGTGATCCATCGGGATGTAAAGTCATCAAATGTATTATTATCTGAGGATTTTGAGCCCCAGCTCTCTGATTTTGGACTGGCAAAATGGGCATCGACCTCATCATCACATATAACCTGCACAGATGTTTCTGGAACCTTCGGTTACTTGGCTCCTGAATACTTCATGTACGGCAAAGTCAATGATAAGATTGATGTCTATGCATTTGGTGTCGTGCTCCTTGAGCTTCTTTCAGGGAGAAAGCCCATAAACCGTGATTATCCAAAAGGCCAAGAGAGTCTAGTCATGTGGGCATGTCCAATTCTTAATAGTGGAAAGGTGTTACAATTGTTAGATCCTGGTTTGGGTGATAATTATGATCATGAGGAGATGGAAAAGATGGTCTTGGCAGCTACTCTCTGTATCAAACGTGCTCCAAGGGCTAGGCCTCAAATGAACATTATATCAAAGCTCCTGCAAGGTGACATCGAAACAATCAAGTGGGCAAGGTTAGAAGTTAATAATACTTTGGATGCAGCAGAAACGCTTGACGATGAAGCGTGTCCACCTAGTAATCTACAGTCACATATAAATCTTGCACTGCAGGATGTGGTGGATGACACACACTCCATGTGCAGTGTTGAGCAAGGTTTGACATTGGAGGACTACTTGAGAGGCCGGTGCAGCCGTGCATCAAGCTTTGACTGA 2253 0.4421 MSPTGPAGEPTLGGSCARAVVVGVKMDSPSKELLTWALVKVAHPGDTVVALHVLGNHETVNGDDKSSLLSLVKAFDSVLTVYEGFCNLKQIDLKLKICRGSSVKKILVREANGYSASYVVVGTTHGRHRIRSSTFVAKYCAKRLSKDCCVLAVNNGKVVFKRDSSPPSVADLQGIDRQHRNGLIGSIHWTLSKNTKVLSDDNSGTDADGKKPGHISDHSLAKFFLDSTETVRKPSCSICGTTLALPDPSCYQSAEGFSGDDGKENSLAIVPVQPTVAEKMELKPGWPLLQRGILSETQSADRSLMHPQISVVQWAMRLPCRNISNAADRDEKSEICDQGPNQPAALDRESGALVPVDSEIGIASSPEGNSRNIPKQLQGLHEKYSSTCRLFEYQELVSATSNFLAENFIGKGGSSQVYRGCLPDGKELAVKILKPSEDVLKEFILEIEIITTLHHKNIISLLGFCFENGKFLLVYDLLSRGSLEENLHGNKKNSHEFGWSERYKVAVGVAEALDYLHSKDDQPVIHRDVKSSNVLLSEDFEPQLSDFGLAKWASTSSSHITCTDVSGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLSGRKPINRDYPKGQESLVMWACPILNSGKVLQLLDPGLGDNYDHEEMEKMVLAATLCIKRAPRARPQMNIISKLLQGDIETIKWARLEVNNTLDAAETLDDEACPPSNLQSHINLALQDVVDDTHSMCSVEQGLTLEDYLRGRCSRASSFD 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01353 750 Pfam Universal stress protein family 18 150 IPR006016 -
Spst9g01353 750 CDD USP_Like 20 153 - -
Spst9g01353 750 ProSitePatterns Serine/Threonine protein kinases active-site signature. 524 536 IPR008271 GO:0004672|GO:0006468
Spst9g01353 750 ProSiteProfiles Protein kinase domain profile. 403 674 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g01353 750 FunFam Putative receptor-like serine/threonine-protein kinase 478 690 - -
Spst9g01353 750 Gene3D Phosphorylase Kinase; domain 1 368 477 - -
Spst9g01353 750 ProSitePatterns Protein kinases ATP-binding region signature. 409 431 IPR017441 GO:0005524
Spst9g01353 750 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 372 477 - -
Spst9g01353 750 Gene3D Transferase(Phosphotransferase) domain 1 478 693 - -
Spst9g01353 750 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 20 154 - -
Spst9g01353 750 Gene3D HUPs 17 155 IPR014729 -
Spst9g01353 750 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 17 154 - -
Spst9g01353 750 SMART serkin_6 403 674 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g01353 750 Pfam Protein kinase domain 407 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g01353 750 PANTHER OS08G0249100 PROTEIN 131 685 IPR046958 -
Spst9g01353 750 SUPERFAMILY Protein kinase-like (PK-like) 384 673 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01353 Spst-Chr9 13256991 13260336 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01353 390 667 Trihelix Transcription Factor Family AT1G68690 45.583 8.59e-74 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Spst9g01353 Pkinase 1.5e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01353 - - pcin:129303222 1010.75