Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01351 ATGGGGTCGTGTGGGAGATCTGCTACCACTAATGATCCCTCTGGAGGTTCTGTTATTGAGCAGCATTTGTGCTCAGAGGTTGCGGAGCAGGTTGTTTCTGTGCAGGAGTCTTGTTTGGAAGAAGCTTGCAAAGTTGTGGACTCTAATACAGACCTCTCCACTATATCTGATGGTTGTGTGGGAGAAGACCTTGTGGGTTCTGCAAGGTGTGTAGATGTGGGTTCTGGTGATGCTTTGGGTTTGGCAAGTGAATGTGAAAATGCTGATTTGTTGATAGTGGAGAAAGCCGCCGAAGATGATTGTCTGAATTTCTTAGGGGTTTCTTATGGAAGCATTGAAGTTCCCTGTGCAAACAGTGGGTCAGAGGGAAATTTTCAGGCTGAGGGCAACTTGGCTTTGGGGTCGGGATCCTTAACTACAGATGATTCAGAGAGGCTCTGTGCTCAACAGGATGAGCAGAAGAATGATAAGAGCGACATATTACCAGCAGGAAAAAACGATGATACGGGTCTTCTTGGTGATGCTTTCACTCCTGTACTTGACTTTAGGGATTCTGAAATGTCTTTGGAATTGGAATCTGTGTCTGACTTGCTAGTTGAATGCAACCAGCAAAATGAGCAGGAGAAAGTTATGAGACATGCGGGTCCCTTGTTGAATGTTGCGGAAAAATGTGATACTCTAATTGGGACAGAACATGATGCTTGCAGACAAATATCTCCTACTCCGGACATGGATGTGCCATCTGGTGCATTATATGCAGATACAGAAGTAGAGAGGAGCACAAGTGATCCAAAAGATGGTGAGGACCAGAATAGTACTTGTGAAGAAAAGGTTAAAGTTTTTGTTGATGAAGAAATCATTCAAATTAATTCATGTGTAAAAATATCATCCTCTCCAGGTTGCCATGGGACTGCTGGGAGCTCATCAGTGGTTGATTATCTTTGTGATCCTGCCCTGTTGGATCCAGGGTGTGAAATGAAGAATGTAGAAGATGCTTTTTGTAAATTGAAGGACTGTTCCTCAGAGGAAACTGGCAACTCTACCTTTAGAACACCATTTTCTCCAGAATCAGGTCTGCCCTCTGTTGCTTCAATTACCAAGTGCCCTTCAAAGGATATTTCTGATCTCCATTGTAAAGGTGATGATGTTTCTATTAACAATAATAGTGCTGTGGACAATCCAGGTCAGATGGATAATGATGGAAAAGAAGCTGTTGAAGTTGATTGTATCACTGAAAGCATACCATTACCTTCTCAAATGAGTAGTCGAAGAAGTAAAGTTGGCAGAAAGACGCAAACCAAAAAGGCTTCAAGAAAATGCAAGACCAAAACCAAGGTGACACGTTCAAATGGGGATCATATTAAGTTATACTCAGAGGCTTCTAGAAAGAAGAGAAGTTGTTTGTCCAAACCAGCTCGTTCTTCTATCTGGGGATTGATTGGGAATATTGAACAGTTTTTTGAGCAAGATAATGAGCATCCAGTTGGTGAAACTGTGTGCCAAGAGTTGGGGAGGGCTAGAAGCAAGCGCCAAACTGGTACAGCAGTTAAGAATGATGCAAGTACTAGTTTAATGAGTTCACTACAGAAGTGTCCTGTTCCAACTACTCGTGTTCGTCTGAAGATCAAATTTGGGAAAGAACCTGATTTAAGATGCTCAAATGTCTTGACTCTGGAGTCTGTTGATGGCTTCGCATCTGCTTCCCTCTTGGAGTCCGGTTCAGCTTCTATGAAAGTAGCCAGTAATGCTGAAGATAAAATGTTGGAAGTGGTGGCTTTGGGCAATGCAGAATCTTTCAACAATGACCTGGATAAGGATGGTCTTGTTCTAAATGGACAAGCAGCAAATAACCCCTTAGAAGAAAATACTGACAGAACAGAGAAGGCAGATGGGGATGTAGAGGAACCTTGTCTTGCAGCTCCTCCAGAGAAGGTGGTTGAAGCATTGATTGAACCTATCAATAACAAGGGTATGGATCCTGGAACTTCACCTGATTCCGAAGTTATCAATTCAGTTCCCGATGTCCAGGTTGGAGAGAGACATCAAGAAGGTTTAGGTTATTCTAAAGTGTTGAATTCTAAATTGACCATCAGTAAAAGGGGGAAGAAGAAAGACAAACTTACATGTTCAGGTAACTGTATCACTGAAGATGAATCACAATGTCCACCTGGGAATAGTAGAGCTAAGCAATCTAAGAATCGCAGCAGGGGTAAGAAAAATTGCAAGGATGCAGTTAGCTCTTTGGAATTGCCTACTTTCACTCAGATAAACAAATCTGTGAACGGTAAAGAATTGTGCCCAGAATCATTGTCCCATTCTGGAGGAACTGAACTTGGAGGCTCTGCTGAGGCTTTGAAGGTTAAAAATCACATGGACATTAAGACAAGTGGCAAACCATCAGTTGACAATGGATTTTCAGATTCGCAGGTTTCTGAGACTATGATGTCTACTGCAAGACCTTTGGGGCGTAAGCTACCTAAAAGTCTTAGACCTAGTAAAGTTACTCGGACCAAATTTAAAGCTTCTGACTCGACTGACAGGAAAAAGACTACTTGTACTCGCAAGGAAAAACAGAAAAAGCCAATTAATAAGTGCGAAGTCAAGGGAAAAGGTGCCTCTCTTAAAATTACATGTCAAATGGAAGATCACCCACATTCAGAAGCAAATGTTGAAAATCATGAGTTGGATGCTGCTGGAAAAATTAATGCTGATAACAACAAAGTATCAGTCAACATATCTAATTCAGACATGCTGTCTGGTGTTGGACTGGGGGAGCAACTTTCATCTCCCCGTAATGCGTGGGTGCGATGCGATGATTGTTACAAATGGCGGCGAATTCCAGCTGTGCTTGCAGATCTAATTGATGAAACTAACTGTACCTGGACATGTAAGGACAGCAGTGACAGGGCCTTTGCTGATTGTGCTATCCCTCAAGAGAAGTCAAATGCGGAGATTAATGCAGAGTTGGGATTATCAGATGCTTCAGGTGAAGAAGATGCATATGAAGGCTCCAAAAACTTTAAGGAATTAGAATATCGGCCTCCATTTGAAGGAAAGTTGGGCTGTGGGGATGAATGCCTAAATCGAATGCTTAATATTGAATGTGTGCAAGGAACATGCCCGTGTGGGGACCGATGTTCCAACCAGCAGTTCCAAAAACGGAAGTATGCTAGCCTGAGGTGGTTTAAATGTGGGAAAAAGGGTTATGGACTAAAGGCACTTGACAATGTAGCTCAAGGACAGTTTCTTATTGAATACGTTGGAGAGGTGCTTGATATGCAATCGTACGAGGCACGGCAAAGAGAATATGCTTTGAAGGGTCATCGACATTTCTATTTTATGACCTTGAATGGCAGTGAGGTTATAGATGCAAGTGCAAAAGGAAACTTGGGGCGTTTCATTAATCATAGTTGTGATCCTAATTGTCGTACAGAAAAGTGGATGGTGAATGGAGAAATCTGTATCGGACTCTTTGCATTGAGGGATATTAAGAAGGATGAAGAATTGACATTTGACTACAACTATGTAAGAGTTTTTGGTGCTGCTGCGAAAAAATGTTACTGTGGTTCACTTAGTTGTCGAGGTTATATAGGTGGTGGTGATCCACTTAAAGCTGAACTGATAGTTCAAAGTGATTCAGAAGAAGAATTTCCAGAACCTGTTATGCTTACCAAAGATGGTGAAATTGAGGATGGAGTGGCTACACCCAAGTATTTTAATAATGTTGATACACAATCTGCTAAACATATGTTAAAAGAAAGGGATATATTGGAAAAGTCTAAAAATGCTGTAGATTCAGGTGGTTTTCCAGAGAAAGAAAGTTCCATGAACCCTGCCTCTGCTGTTTCTCTGTTGCACAGCTCAGCAGAAATGGAGGAGGATTCAAAGGGCAAGTTACCATCCTCTGTCCGAGTTGAAGAAATTTCTGAACAATTGGAGGATGTAACAAGCAAACCCATGCTTGCTGTACAACAAGAAAAAGAAAAGGAATCAGAGTTTCCAGACAAAACTTCTTCTACTCAAAGATTAGAGACTACTTCTTCCCATGCAACTGCTAGCAAAATGTTGTCCAATTCTACTGGTAGTAATAGGGAGTCCAAGTCTGAAATAAATGAAGGCAGGAAGACTCCTAAGTCAAATAGTTCTGTTAAAAAGGGAAAGGTTAATGCTAATCCTCCAAATGGCCTCAAAGCTGAGATGACAGCGAATCGATTGCAGTTGTCATCTATCAAACACAAAAAAGTTGAAGGTTCTTCCAATGGACGGTTTGAAGCAGTTCAGGAGAAACTTAATGAGTTGTTGGATGGAGATGGGGGAATAAGCAAAAGAAAGGATGCTACCAAAGGTTACTTGAAGCTTTTATTTCTCACTGTTGCATCTGGTGATAGAAGCAACGGTGAAGCAATTCAAAGTAATCGAGATCTTTCCATGATACTTGATGCCCTTCTGAAAACAAAATCTAGAGCAGTGCTGAATGATATAATTAGCAAAAATGGTTTACAGATGTTACATAATATTATGAAGCAGTACAGGCTGGACTTCAAAAAAATTCCAATACTACGAAAGCTTCTTAAGCTTTGTGGCCCTGAAAATGAACTTTGTGACCCGGGTCATAATTCCTCTTTCATCAACTTGCATTTAGTTTTCATCGTTGTGCCAAAATTTCATGGCTCCATCATCGTTGAAACCCATACATTGAAAGTGGTTACTGTCTCTTCCCCCCTTTGCCTGTCCATTGTGTCTCCCACAGGGCCTTTCCTCTTCATTACTTGTTTCTACTCTGACTATGATTTTCAAAACCTGAATCCTTTATTTGGTTGCTCCACCACTTTCCCATTGTCATGCAATCTACATGCACCAAGTCCCAACAGTCTTAAAGTTACACTCTGTCACTTTGCCAAGAATTTGGCTCCTGGTCTTTCCCTTTGCCATGATTATCCCTTCTTTAGGGAGTCAATGCTTTCTCTGACAGAGCATGACGACAAACAGGTCCATCAAATTGCTCGAAGCTTCCGAGACAGATGGTTTCCCAGACCCATCAGAAAACATGGCTATTTGGACAGGGATGATAATAGAATGGAATCCCACAGAAGTTTCAACGGTAACAGATTTTCAGCATCACACAGTCACAGGCATGAGCAGGATTTAAGGGCTACAGATGCAATTGACTGTAGTCAGCAGTCGATGCTTGTGACAAATCCAGTAGATGCTGATACCCAAGACAGCTGTCCCGCCCGCACTCTAGATGGGGTTGAAATCAAAGGGGCTAAAAAGCGGAAGCGTAAGAGCCGGTGGGATCAACCAGCAGAGACAAACTTGCTATCTGATGCCGTTATGAGCTCTATTGGTGAAAGCCAGAACATTCATGAGGATGTTCCACCAGGGTTTTCGTGTCCAATAGGTCCATTAAATGCTTCCCTGAACTCTAGTAATCTTGCATTACAAAATGCAAGCCGATCTGGATGTCCCTCTGATTTTGTCATTGGTCATCCAAAAAAGAAATTTAACTCTCGCTTGCCTGTGTCATATGGAATGCCATGGTCTGTTACCCAGCAATATGGAACACCTCATACTGAATTTCCAGAGTGTTGGGTTACTGCACCTGGCATGCCTTTCAACCCATTTCCTCCCCTACCCCCATATCCTCGGGACAACAAAGACTGTCAACCTACTAATAATAGTAGTGCTATGATAATTGATCAGCCTGCTGAAGCTATGATTATTGACCAGTCTGCTGATGTTAATGAGGGTGATACCAGTGGTATGGTCAGTTGTAGCGCAGATGATATGATTCCCAGCACAACTGGTGCTAACACTGGGGACTCTGACCTTCTGTTCGAGGATAATGAACACATAGCTAAACGATTGAAGGGTGAATCCCATGATTTGGTAAGGAAGTACTATAGACAACAAAAATGGAATAATTCAAAAATAGATCGACCATGGTTCCGGAGGAATGCATGGAAATGTAATGAGAACAATTCTGATGGTGATATGTGCAGTATAGTTGTAGATGTACCAAAAGAGTCAGAAGATACTTGTGATGCGGAGGATGCAATCTGTAGAGAGGAGAACGGTGACAATAATATTTATTAG 6096 0.4185 MGSCGRSATTNDPSGGSVIEQHLCSEVAEQVVSVQESCLEEACKVVDSNTDLSTISDGCVGEDLVGSARCVDVGSGDALGLASECENADLLIVEKAAEDDCLNFLGVSYGSIEVPCANSGSEGNFQAEGNLALGSGSLTTDDSERLCAQQDEQKNDKSDILPAGKNDDTGLLGDAFTPVLDFRDSEMSLELESVSDLLVECNQQNEQEKVMRHAGPLLNVAEKCDTLIGTEHDACRQISPTPDMDVPSGALYADTEVERSTSDPKDGEDQNSTCEEKVKVFVDEEIIQINSCVKISSSPGCHGTAGSSSVVDYLCDPALLDPGCEMKNVEDAFCKLKDCSSEETGNSTFRTPFSPESGLPSVASITKCPSKDISDLHCKGDDVSINNNSAVDNPGQMDNDGKEAVEVDCITESIPLPSQMSSRRSKVGRKTQTKKASRKCKTKTKVTRSNGDHIKLYSEASRKKRSCLSKPARSSIWGLIGNIEQFFEQDNEHPVGETVCQELGRARSKRQTGTAVKNDASTSLMSSLQKCPVPTTRVRLKIKFGKEPDLRCSNVLTLESVDGFASASLLESGSASMKVASNAEDKMLEVVALGNAESFNNDLDKDGLVLNGQAANNPLEENTDRTEKADGDVEEPCLAAPPEKVVEALIEPINNKGMDPGTSPDSEVINSVPDVQVGERHQEGLGYSKVLNSKLTISKRGKKKDKLTCSGNCITEDESQCPPGNSRAKQSKNRSRGKKNCKDAVSSLELPTFTQINKSVNGKELCPESLSHSGGTELGGSAEALKVKNHMDIKTSGKPSVDNGFSDSQVSETMMSTARPLGRKLPKSLRPSKVTRTKFKASDSTDRKKTTCTRKEKQKKPINKCEVKGKGASLKITCQMEDHPHSEANVENHELDAAGKINADNNKVSVNISNSDMLSGVGLGEQLSSPRNAWVRCDDCYKWRRIPAVLADLIDETNCTWTCKDSSDRAFADCAIPQEKSNAEINAELGLSDASGEEDAYEGSKNFKELEYRPPFEGKLGCGDECLNRMLNIECVQGTCPCGDRCSNQQFQKRKYASLRWFKCGKKGYGLKALDNVAQGQFLIEYVGEVLDMQSYEARQREYALKGHRHFYFMTLNGSEVIDASAKGNLGRFINHSCDPNCRTEKWMVNGEICIGLFALRDIKKDEELTFDYNYVRVFGAAAKKCYCGSLSCRGYIGGGDPLKAELIVQSDSEEEFPEPVMLTKDGEIEDGVATPKYFNNVDTQSAKHMLKERDILEKSKNAVDSGGFPEKESSMNPASAVSLLHSSAEMEEDSKGKLPSSVRVEEISEQLEDVTSKPMLAVQQEKEKESEFPDKTSSTQRLETTSSHATASKMLSNSTGSNRESKSEINEGRKTPKSNSSVKKGKVNANPPNGLKAEMTANRLQLSSIKHKKVEGSSNGRFEAVQEKLNELLDGDGGISKRKDATKGYLKLLFLTVASGDRSNGEAIQSNRDLSMILDALLKTKSRAVLNDIISKNGLQMLHNIMKQYRLDFKKIPILRKLLKLCGPENELCDPGHNSSFINLHLVFIVVPKFHGSIIVETHTLKVVTVSSPLCLSIVSPTGPFLFITCFYSDYDFQNLNPLFGCSTTFPLSCNLHAPSPNSLKVTLCHFAKNLAPGLSLCHDYPFFRESMLSLTEHDDKQVHQIARSFRDRWFPRPIRKHGYLDRDDNRMESHRSFNGNRFSASHSHRHEQDLRATDAIDCSQQSMLVTNPVDADTQDSCPARTLDGVEIKGAKKRKRKSRWDQPAETNLLSDAVMSSIGESQNIHEDVPPGFSCPIGPLNASLNSSNLALQNASRSGCPSDFVIGHPKKKFNSRLPVSYGMPWSVTQQYGTPHTEFPECWVTAPGMPFNPFPPLPPYPRDNKDCQPTNNSSAMIIDQPAEAMIIDQSADVNEGDTSGMVSCSADDMIPSTTGANTGDSDLLFEDNEHIAKRLKGESHDLVRKYYRQQKWNNSKIDRPWFRRNAWKCNENNSDGDMCSIVVDVPKESEDTCDAEDAICREENGDNNIY 2031
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01351 2031 Gene3D SET domain 977 1209 IPR046341 -
Spst9g01351 2031 CDD SET_SETD2 1056 1198 IPR044437 GO:0010452|GO:0046975
Spst9g01351 2031 SMART set_7 1057 1180 IPR001214 GO:0005515
Spst9g01351 2031 Pfam CW-type Zinc Finger 934 980 IPR011124 GO:0008270
Spst9g01351 2031 PANTHER SET DOMAIN PROTEINS 437 1771 - -
Spst9g01351 2031 SMART PostSET_3 1182 1198 IPR003616 -
Spst9g01351 2031 MobiDBLite consensus disorder prediction 1338 1366 - -
Spst9g01351 2031 Gene3D - 927 976 - -
Spst9g01351 2031 MobiDBLite consensus disorder prediction 836 860 - -
Spst9g01351 2031 FunFam Histone-lysine N-methyltransferase 926 987 - -
Spst9g01351 2031 ProSiteProfiles Zinc finger CW-type profile. 928 982 IPR011124 GO:0008270
Spst9g01351 2031 ProSiteProfiles AWS domain profile. 1005 1055 IPR006560 GO:0005634|GO:0042054
Spst9g01351 2031 MobiDBLite consensus disorder prediction 1261 1280 - -
Spst9g01351 2031 ProSiteProfiles Post-SET domain profile. 1182 1198 IPR003616 -
Spst9g01351 2031 MobiDBLite consensus disorder prediction 418 439 - -
Spst9g01351 2031 MobiDBLite consensus disorder prediction 1310 1396 - -
Spst9g01351 2031 FunFam Histone-lysine N-methyltransferase 980 1213 - -
Spst9g01351 2031 ProSiteProfiles SET domain profile. 1057 1174 IPR001214 GO:0005515
Spst9g01351 2031 MobiDBLite consensus disorder prediction 717 743 - -
Spst9g01351 2031 Pfam SET domain 1068 1174 IPR001214 GO:0005515
Spst9g01351 2031 MobiDBLite consensus disorder prediction 1323 1337 - -
Spst9g01351 2031 SMART shorttest3 1007 1056 IPR006560 GO:0005634|GO:0042054
Spst9g01351 2031 SUPERFAMILY SET domain 1012 1195 IPR046341 -
Spst9g01351 2031 Pfam AWS domain 1020 1054 IPR006560 GO:0005634|GO:0042054
Spst9g01351 2031 MobiDBLite consensus disorder prediction 833 860 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01351 Spst-Chr9 13227385 13242261 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01351 1040 1197 C2H2 Transcription Factor Family AT2G23740 33.143 5.98e-20 95.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Spst9g01351 SET 8.7e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01351 - - gmx:100795379 2223.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01351 9 13227385 13242261 Spst9g01351 9 13227385 13242261 ECH