Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01317 ATGGAGTTTGTGGATACCAGAAAACTACAGTTACAGCAACAACTGCAACAACAGCCGCAACCGCAGGAGCAACATTTTCATGTGTTGGCAGTGGACGACAGTGTCATAGATAGGAAGCTTTTGGAGAGGCTCCTAAGAGGTTCTTCATGCAAAGTTACCTGCGTGGACTCTGGAGACAAGGCTCTGAAATATCTTGGGTTGGTTGATGACCTCCATGATACTACTTCTTCAACCTCTTTAGACTCATCATCTTCTCCTCCACCTCAACCATTGCAGGAAGAGGGAATGAAAGTGAATTTGATCATGACAGACTATTGCATGCCTGGGATGAGTGGCTATGATTTACTAAAACGAGTCAAGGGATCTTCTTGGAAAGATGTTCCAGTCGTGATCATGTCATCAGAAAATGTACCTTCCAGAATCAGCATGTGCTTAGAAGGAGGTGCAGAAGAGTTTCTGTTGAAGCCTCTTCAATTATCAGATTTGGATAAGCTTCAATCATACTTTGTGAAATCTCTTGAAAACTCTTGTGAAAAAGAATCTGTTAACAGTTCCATAGATTCGGAGAATGACAATGTGATCATCAACATCAGTAACCATAATCATAACAGTAACAGTGTTAGCAAAAGGAAGGCCATATCTGCTGAGTCTCATCAAGAGAGATCAAGAACCAAAATGAAAGAGTTGGCTGTGGTGTAA 699 0.4149 MEFVDTRKLQLQQQLQQQPQPQEQHFHVLAVDDSVIDRKLLERLLRGSSCKVTCVDSGDKALKYLGLVDDLHDTTSSTSLDSSSSPPPQPLQEEGMKVNLIMTDYCMPGMSGYDLLKRVKGSSWKDVPVVIMSSENVPSRISMCLEGGAEEFLLKPLQLSDLDKLQSYFVKSLENSCEKESVNSSIDSENDNVIINISNHNHNSNSVSKRKAISAESHQERSRTKMKELAVV 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01317 232 MobiDBLite consensus disorder prediction 199 232 - -
Spst9g01317 232 Pfam Response regulator receiver domain 96 163 IPR001789 GO:0000160
Spst9g01317 232 CDD REC_typeA_ARR 28 165 - -
Spst9g01317 232 ProSiteProfiles Response regulatory domain profile. 27 170 IPR001789 GO:0000160
Spst9g01317 232 Gene3D - 27 231 - -
Spst9g01317 232 SUPERFAMILY CheY-like 26 171 IPR011006 -
Spst9g01317 232 MobiDBLite consensus disorder prediction 213 232 - -
Spst9g01317 232 PANTHER TWO-COMPONENT RESPONSE REGULATOR 24 219 IPR045279 GO:0009736
Spst9g01317 232 SMART REC_2 26 166 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01317 Spst-Chr9 12792589 12795331 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01317 23 190 Response Regulator Gene Family AT3G57040 55.030 1.08e-58 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Spst9g01317 Response_reg 1.7e-13 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01317 K14492 - gmx:100801334 325.865