Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01312 ATGGCTCTCTTCAGCGGCGCCGCCTCCGCTCGCATCATTCCCTCCGTCTCACTCTCCTCCTCGTCTCGCGCCTTCTTCTCCCTCTCATCCTCTTCTTCCTCGCTCGAATGCTTGCGCTCCTCTCCTCGCATTTCGCACCTGTTTCTCAATCAGCGGAGAGCGGAGGTTCGCGTTTCGAGTGGAGGATATGGAACGGTGTCGGCACCGAAGTCCTTTGCGTCTGATCCTGATCAGTTGAAGAGCGCTAGAGAAGATATCAAGGAGCTTCTCAGGTCCAAGTTCTGTCATCCTATTCTGATTCGTTTGGGATGGCATGATGCTGGTACTTATAATAAGAATATTGAGGAATGGCCACAAAGAGGTGGAGCTAATGGTAGCTTAAGATTTGAAGTTGAGCTGAAACATGCAGCCAATGCTGGACTTGTAAATGCATTGAAACTTCTTCAGCCAATCAAAGACAAATACTCTGGTGTGACATATGCAGACTTATTTCAGTTGGCCGGTGCTACAGCTGTGGAGGAAGCTGGAGGCCCAAAACTCCCTATGAAATATGGAAGAGTAGATGTATCTGAACCTGAGCAATGCCCTGAAGAAGGGAGACTTCCTGATGCCGGCCCCCCTTCACCTGCTGATCATTTGCGTCAAGTTTTCTACCGAATGGGTTTGAATGACAAGGAAATTGTGGCATTATCTGGTGCACACACACTGGGGCGGTCTAGACCAGATCGAAGTGGTTGGGGAAAGCCTGAGACTAAATATACGAAAGATGGGCCAGGAGCACCTGGAGGACAATCTTGGACTGCGCAATGGTTGAAATTTGACAACTCTTACTTTAAGGACATCAAAGAAAAAAAGGATGAAGATCTATTAGTATTACCAACTGATGCTGCTCTTTTTGAGGACCCATCCTTCAGGGTATATGCTGAGAAATATGCCGAAGATCAGGAAGCATTCTTTAAAGATTATGCTGAAGCCCATGCAAAACTTAGCAACCTTGGAGCCAAATTTGATCCTCCAGAGGGCATTGTGATAGGTGATTCTCCAAATGCAGGGGCAGAGAAGTTTGTAGCAGCCAAGTACTCCAGTGGAAAGAGAGAGCTGTCTGACGCTATGAAGCAGAAGATTCGGGCTGAATATGAGGCCATTGGTGGAAGCCCAGATAAGCCTCTACAGTCAAACTATTTTCTAAATATCATAATTATTATTGCAGTTTTGGCATTTTTGACATCACTTCTTGGAAACTAG 1245 0.4651 MALFSGAASARIIPSVSLSSSSRAFFSLSSSSSSLECLRSSPRISHLFLNQRRAEVRVSSGGYGTVSAPKSFASDPDQLKSAREDIKELLRSKFCHPILIRLGWHDAGTYNKNIEEWPQRGGANGSLRFEVELKHAANAGLVNALKLLQPIKDKYSGVTYADLFQLAGATAVEEAGGPKLPMKYGRVDVSEPEQCPEEGRLPDAGPPSPADHLRQVFYRMGLNDKEIVALSGAHTLGRSRPDRSGWGKPETKYTKDGPGAPGGQSWTAQWLKFDNSYFKDIKEKKDEDLLVLPTDAALFEDPSFRVYAEKYAEDQEAFFKDYAEAHAKLSNLGAKFDPPEGIVIGDSPNAGAEKFVAAKYSSGKRELSDAMKQKIRAEYEAIGGSPDKPLQSNYFLNIIIIIAVLAFLTSLLGN 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01312 414 ProSitePatterns Peroxidases proximal heme-ligand signature. 226 236 IPR019793 -
Spst9g01312 414 PRINTS Haem peroxidase superfamily signature 158 175 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst9g01312 414 PRINTS Haem peroxidase superfamily signature 96 110 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst9g01312 414 PRINTS Haem peroxidase superfamily signature 266 281 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst9g01312 414 PRINTS Haem peroxidase superfamily signature 226 241 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst9g01312 414 PRINTS Haem peroxidase superfamily signature 176 188 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst9g01312 414 FunFam L-ascorbate peroxidase T, chloroplastic 204 327 - -
Spst9g01312 414 SUPERFAMILY Heme-dependent peroxidases 76 335 IPR010255 GO:0004601|GO:0006979|GO:0020037
Spst9g01312 414 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 66 337 IPR044831 GO:0004601|GO:0034599
Spst9g01312 414 Gene3D Peroxidase, domain 2 204 327 - -
Spst9g01312 414 PRINTS Plant ascorbate peroxidase signature 96 111 IPR002207 GO:0004601|GO:0006979|GO:0020037
Spst9g01312 414 PRINTS Plant ascorbate peroxidase signature 157 175 IPR002207 GO:0004601|GO:0006979|GO:0020037
Spst9g01312 414 PRINTS Plant ascorbate peroxidase signature 176 188 IPR002207 GO:0004601|GO:0006979|GO:0020037
Spst9g01312 414 PRINTS Plant ascorbate peroxidase signature 75 95 IPR002207 GO:0004601|GO:0006979|GO:0020037
Spst9g01312 414 PRINTS Plant ascorbate peroxidase signature 295 319 IPR002207 GO:0004601|GO:0006979|GO:0020037
Spst9g01312 414 Gene3D - 82 335 - -
Spst9g01312 414 FunFam L-ascorbate peroxidase S chloroplastic/mitochondrial 82 206 - -
Spst9g01312 414 Pfam Peroxidase 83 314 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst9g01312 414 CDD ascorbate_peroxidase 67 337 - -
Spst9g01312 414 ProSiteProfiles Plant heme peroxidase family profile. 99 361 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst9g01312 414 MobiDBLite consensus disorder prediction 233 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01312 Spst-Chr9 12742629 12749716 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01312 158 335 Peroxidase AT4G17690 35.052 1.16e-18 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01312 K00434 - csav:115707840 682.559