Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01311 ATGATTGGTATGCTTAAAAACTCATGTGAAGTAATACTGAAGGAATTGAAACATTGGATGACGCCAGAAAAGGTCAAAACTTCAATTAGAACATTTCCATCTTCAGCTGAAATAGTACCTGAACCTCTGGGTGTTGTGTTGGTCATCTCTGCATGGAACTATCCACTTTTGTTGTCCCTTGATCCGGTCGTTGGAGCCATAGCAGCAGGTAATGCTGTGGTTCTAAAGCCATCAGAAATTGCTCCAGCCACATCATCACTACTAGCAAAATTGATAGAAAAGTATATGGATCCCTCGTTTGTGAGAGTTGTCGAGGGGGAAGTTGATGAAACAACTGCACTATTGCAGCAAAAGTGGGACAAAATTTTCTACACAGTAATTGCTGGATTGTTAGGTAATGGAAGAGTGGGAAGGATAATGATGACTGCTGCTGCAAAACACCTTACACCAGTTGTGCTGGAGCTTGGAGGAAAATCTCCCGTTGTCGTTGATTCAAATATCAATTTGAAGGTAGCAACTAGACGAATAATTTATGGCAAGTGGGGATTGAATAATGGACAAGCCTGCATTTCTCCTGATTATGTGAATGCCCTCAAGACCGAATTGGAGGAGTGTTACGGTAAGAATCCGATGGAATCTGAAGATTTGTCTCGAATTGTGAGTTCCAACCACTTTGCTCGCTTGTCAAGGTTCTTGAATGATGATAAGGTTTCTGGCAAGATTGTCTACGGAGGTGAAAAGGATGAAAAGAAATTAAGGATTGCTCCCACTATTTTATTGGATGTTCCGCGAGATTCTCTGATAATGGGCGAGGAGATATTTGGTCCATTGCTTCCTATCATCACGGTCAATAAACTTGAAGAAAGTCTAGATTTGATCATCTCAGGAGAGAAGCCCCTGGCTGCATATGTATTTACAACCGACAAGAAGTTCAAAGAGCAGTTCGTAAAGAATGTTTCTTCTGGGGGTTTGCTTGTCAATGACACTACCCTACATCTTGTGGTTGATACTCTGCCATTTGGGGGAGTTGGAGAAAGTGGAATGGGAGCATACCATGGGAAGTTCTCCTTTGATGCTTTTACACACAAAAAGGCCGTTCTTTATCGCAGTTTTGCGGGTGATTCGTCATTAAGGTACCCACCATACACGGATACAAAGAAGAGATTGATGAAGGCTGTCGTCGGTGGCAGGATCCTTGGCATAATTCGTGCTCTTTTAGGGCAATCCTAA 1230 0.4236 MIGMLKNSCEVILKELKHWMTPEKVKTSIRTFPSSAEIVPEPLGVVLVISAWNYPLLLSLDPVVGAIAAGNAVVLKPSEIAPATSSLLAKLIEKYMDPSFVRVVEGEVDETTALLQQKWDKIFYTVIAGLLGNGRVGRIMMTAAAKHLTPVVLELGGKSPVVVDSNINLKVATRRIIYGKWGLNNGQACISPDYVNALKTELEECYGKNPMESEDLSRIVSSNHFARLSRFLNDDKVSGKIVYGGEKDEKKLRIAPTILLDVPRDSLIMGEEIFGPLLPIITVNKLEESLDLIISGEKPLAAYVFTTDKKFKEQFVKNVSSGGLLVNDTTLHLVVDTLPFGGVGESGMGAYHGKFSFDAFTHKKAVLYRSFAGDSSLRYPPYTDTKKRLMKAVVGGRILGIIRALLGQS 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01311 409 FunFam Aldehyde dehydrogenase 1 160 - -
Spst9g01311 409 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 153 160 IPR029510 GO:0016491
Spst9g01311 409 FunFam Aldehyde dehydrogenase 157 346 - -
Spst9g01311 409 Pfam Aldehyde dehydrogenase family 33 366 IPR015590 GO:0016491
Spst9g01311 409 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 3 364 IPR016162 GO:0016491
Spst9g01311 409 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 157 346 IPR016163 GO:0016620
Spst9g01311 409 PIRSF ALDH 1 404 IPR012394 GO:0006081
Spst9g01311 409 PANTHER ALDEHYDE DEHYDROGENASE 2 400 IPR012394 GO:0006081
Spst9g01311 409 SUPERFAMILY ALDH-like 6 379 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01311 Spst-Chr9 12719580 12735823 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01311 1 407 Aldehyde Dehydrogenase Gene Family AT1G44170 67.943 0.0 592
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01311 K00128 - gmx:100803104 706.057