Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01310 ATGTCCGGTGAGGATTCACAGACACAGAAGAAGGCAGTGTTTGACGCAGAGACGGCGTCGTCTCTGATGAAGGAGTTAAGGGAGAACTTCGGTTCAAGAAGGAGTCGAAGTTATGAATGGAGAGTGTCGCAGGTGAAGGCTCTCTTGAAGGCCGTGCTTAATAACGAAGAGCAAATCGTGAACGCTCTTCGTTCAGACCTAGCCAAGCCTCCACTCGAAACTGTCGTATACGAGATTGGTATGCTTAAAAACTCATGTGAAGTAATACTGAAAGAATTGAAACATTGGATGACGCCAGAAAAGGTCAAAACTTCAATCAGAACATTTCCATCTTCAGCTGAAATAATACCTGAACCTCTGGGTGTTGTGTTGGTCATCTCTGCATGGAACTATCCACTTTTGTTGTCCCTTGACCCGGTCGTTGGAGCCATAGCAGCAGGTAATGCTGTGGTTCTAAAGCCATCAGAAATTGCTCCAGCCACATCATCACTACTAGCAAAATTGATAGAAAAGTATATGGATCCCTCGTTTGTGAGAGTTGTCGAGGGGGCAGTTGATGAAACAACTGCATTATTGCAGCAAAAGTGGGACAAAATTTTCTACACAGTAATTGCTGGATTGTTAGGTAATGGAAGAGTGGGAAGGATAGTGATGACTGCTGCTGCAAAACACCTTACACCAGTTGTGCTGGAGCTTGGAGGAAAATCTCCCGTTGTCGTTGATTCAAATATCAATTTGAAGGTAGCAGCTAGACGAATAATTTCTGGCAAGTGGGGATTGAATAATGGACAAGCCTGCATTTCTCCTGATTATGTTATAACAACAAAAGACTATGCTCCCAATTTGGTGAATGCCCTCAAGACCGAATTGGAGGAGTGTTACGGTAAGAATCCGATGGAATCTGAAGATTTGTCTCGAATTGTGAGTTCCAACCACTTTGCTCGCTTGTCAAGGTTCTTGAATGATGATAAGGTTTCTGGCAAGATTGTTTACGGAGGTGAAAAGGATGAAAAGAAATTAAGGATTGCTCCTACTATTTTATTGGATGTTCCGCGAGATTCTCTGATAATGGGCGAGGAGATATTTGGTCCATTGCTTCCTATCATCACGGTCAATAAACTTGAAGAAAGTCTAGATTTGATCATCTCAGGAGAGAAGCCCCTGGCTGCATATGTATTCACAAACGACAAGAAGTTCCAGGAGCAGTTCGTAAAGAATGTTTCTTCTGGGGGTTTACTTGTCAATGACACTACCCTACATCTTGTGGTTGATACTTTGCCATTTGGGGGAGTTGGAGAAAGTGGAATGGGAGCATACCACGGGAAGTTCTCGTTTGATGCTTTTACACACAAAAAGGCTGTTCTTTATCGCAGTTTTGCGGGTGACTCGTCGTTAAGGTACCCACCATACACGGATACAAAGCAGAGATTGATGAAGGCTCTCATCGGTGGCAGCATCCTTGGCATAATTCGTGCTCTTTTGGGGTCGTCCTAA 1494 0.4371 MSGEDSQTQKKAVFDAETASSLMKELRENFGSRRSRSYEWRVSQVKALLKAVLNNEEQIVNALRSDLAKPPLETVVYEIGMLKNSCEVILKELKHWMTPEKVKTSIRTFPSSAEIIPEPLGVVLVISAWNYPLLLSLDPVVGAIAAGNAVVLKPSEIAPATSSLLAKLIEKYMDPSFVRVVEGAVDETTALLQQKWDKIFYTVIAGLLGNGRVGRIVMTAAAKHLTPVVLELGGKSPVVVDSNINLKVAARRIISGKWGLNNGQACISPDYVITTKDYAPNLVNALKTELEECYGKNPMESEDLSRIVSSNHFARLSRFLNDDKVSGKIVYGGEKDEKKLRIAPTILLDVPRDSLIMGEEIFGPLLPIITVNKLEESLDLIISGEKPLAAYVFTNDKKFQEQFVKNVSSGGLLVNDTTLHLVVDTLPFGGVGESGMGAYHGKFSFDAFTHKKAVLYRSFAGDSSLRYPPYTDTKQRLMKALIGGSILGIIRALLGSS 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01310 497 FunFam Aldehyde dehydrogenase 234 434 - -
Spst9g01310 497 SUPERFAMILY ALDH-like 23 467 IPR016161 GO:0016491
Spst9g01310 497 PIRSF ALDH 4 491 IPR012394 GO:0006081
Spst9g01310 497 Pfam Aldehyde dehydrogenase family 14 454 IPR015590 GO:0016491
Spst9g01310 497 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 27 452 IPR016162 GO:0016491
Spst9g01310 497 FunFam Aldehyde dehydrogenase 27 237 - -
Spst9g01310 497 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 230 237 IPR029510 GO:0016491
Spst9g01310 497 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 234 434 IPR016163 GO:0016620
Spst9g01310 497 PANTHER ALDEHYDE DEHYDROGENASE 18 487 IPR012394 GO:0006081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01310 Spst-Chr9 12621009 12625403 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01310 79 495 Aldehyde Dehydrogenase Gene Family AT1G44170 69.544 0.0 621
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01310 K00128 - gmx:100783726 849.351