Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01309 ATGTCGGGTGAGGATTCAAAGACACAGAAGAAGGTGTTTGACGCAGAAACGGCGTCGTCTCTGGTGAAGGAGTTGAGGGAGAACTTCGGTTCAGGAAGGACGCGAAGTTATGAATGGAGAGTGTCGCAGGTGAAGGTTCTCTTGAAGGCCGTGCTTGATAACGAAGAGCAAATCATCGATGCTCTTCGTTCAGACCTAGCCAAGCCTCCACTCGAAACTGTCGTGTACGAGATTGGTATGTTTAAAAACTCATGTGAATTAATACTGAAGGAATTGAAACATTGGATGACGCCAGAAAAGGTCAAAACTTCAATCAGAACTTTTCCATCTTCAGCTGAAATAGTCCCTGAGCCGCTCGGTCTTGTGTTAGTCATCTCTCCATGGAACTATCCAATTTTGTTGTCCCTTGATCCGGTCGTTGGAGCTATAGCCGCTGGTAATGCTGTGGTTCTAAAGCCATCAGAAATTACTCCAGCCACATCGTCTGTACTAGCAAAAATAATAGAGGAGTATATGGATCATTCATTTGTAAGAGTTGTCCAGGGGGCAGTTGATGAAACAACTGCACTATTGCAGCAAAAGTGGGACAAAATTTTCTACACAGGTAATGGAAAAGTGGGAAGAATAGTGATGACTGCTGCTGCAAAACACCTTACACCAGTTGCGCTGGAGCTTGGAGGAAAATGTCCCGCTGTCGTTGATTCAAATGTCAATTTGAAGGTAGCAGCTAGACGAATAATTTCTGGCAAGTGGGGATTGAATAATGGACAAGCCTGCGTTTCTCCCGATTACATCATAACAACAAAAGAATATGTTCCCAAGTTGTTGGATGCCTTAAAGACTGAATTGGAGGCGTGTTACGGTAAGAATCCGTTGGAATCTGAAGATTTGTCTCGAATTGTGAGTTCCAACCACTTTGCTCGCTTGTCAAAGCTCTTAAATGATGATAAGGTTTCTGGAAAGATTGTCTATGGTGGTGAAAAGGATGAAAATAAACTAAGGATTGCTCCCACTATTTTATTGGATGTTCCGCAAGATTCTCTGGTAATGGGTGAGGAGATATTTGGTCCATTGCTTCCTGTCATCACGGTCAATAAACTTGAAGAAAGTCTAGATTTGATCAATTCAGGAGAGAAGCCCCTCGCTGCATATGTATTTACAACCGACAAGAAGTTCAAGGAGCAATTCGTAAAGAATGTTTCTGCTGGGGGTTTGCTTGTCAATGACACTAGCCTACATCTTGTGGTTGAGACTTTGCCATTTGGGGGAGTTGGAGAAAGTGGAATGGGAGCATACCACGGGAAGTTCTCGTTTGATGCTTTTACACACAAAAAGGCTGTTCTTTATCGCAGTTTTGCGGGTGACTCGTCGTTAAGGTACCCACCATACACGGATACAAAGCAGAGATTGATGAAGGCTCTCATCGGTGGCAGCATCCTTGGCATAATTCGTGCTCTTTTAGGGTCGTCCTAA 1473 0.4372 MSGEDSKTQKKVFDAETASSLVKELRENFGSGRTRSYEWRVSQVKVLLKAVLDNEEQIIDALRSDLAKPPLETVVYEIGMFKNSCELILKELKHWMTPEKVKTSIRTFPSSAEIVPEPLGLVLVISPWNYPILLSLDPVVGAIAAGNAVVLKPSEITPATSSVLAKIIEEYMDHSFVRVVQGAVDETTALLQQKWDKIFYTGNGKVGRIVMTAAAKHLTPVALELGGKCPAVVDSNVNLKVAARRIISGKWGLNNGQACVSPDYIITTKEYVPKLLDALKTELEACYGKNPLESEDLSRIVSSNHFARLSKLLNDDKVSGKIVYGGEKDENKLRIAPTILLDVPQDSLVMGEEIFGPLLPVITVNKLEESLDLINSGEKPLAAYVFTTDKKFKEQFVKNVSAGGLLVNDTSLHLVVETLPFGGVGESGMGAYHGKFSFDAFTHKKAVLYRSFAGDSSLRYPPYTDTKQRLMKALIGGSILGIIRALLGSS 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01309 490 FunFam Aldehyde dehydrogenase 227 427 - -
Spst9g01309 490 PIRSF ALDH 4 484 IPR012394 GO:0006081
Spst9g01309 490 PANTHER ALDEHYDE DEHYDROGENASE 17 480 IPR012394 GO:0006081
Spst9g01309 490 FunFam Aldehyde dehydrogenase 26 230 - -
Spst9g01309 490 Pfam Aldehyde dehydrogenase family 14 447 IPR015590 GO:0016491
Spst9g01309 490 SUPERFAMILY ALDH-like 21 460 IPR016161 GO:0016491
Spst9g01309 490 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 26 445 IPR016162 GO:0016491
Spst9g01309 490 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 227 427 IPR016163 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01309 Spst-Chr9 12600730 12605308 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01309 7 490 Aldehyde Dehydrogenase Gene Family AT4G34240 61.777 0.0 620
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01309 K00128 - gmx:100803104 853.588