Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01302 ATGACATCAGAGCTTCAATTGCCTCCAGGCTTCAGATTCCATCCAACGGACGAGGAGCTCGTCATGCACTATCTCTGCCGCAAATGCGCGTCGCAGCCCATCGCCGTTCCCATCATCGCCGAAATCGACCTCTACAAATACGACCCCTGGGACCTTCCCGGTCTGGCTTCTTATGGAGAGAAAGAGTGGTACTTCTTTTCACCACGGGACCGGAAGTACCCCAACGGTTCGAGGCCGAACCGGGCGGCGGGAACCGGTTACTGGAAGGCAACCGGGGCGGATAAGCCCATTGGTCACCCGAAACCGGTTGGGATCAAGAAAGCGTTGGTGTTCTACGCTGGAAAAGCTCCGAAAGGGGACAAAACCAATTGGATCATGCACGAGTATCGTCTCGCTGATGTAGATCGCTCCGTTCGCAAAAAGAACAGCCTAAGGTTGGATGATTGGGTGCTGTGCCGTATATACAACAAGAAGGGCACGATCGAGAAATTACAACCGAGCAGCGACGTTATTATGAGTCGGAAAACTGAATCGTCGGAAATCGAAGAAAAGAAGCCGGAGATTCTGAAAACCGGAGGAGGTCTTCCGCTGGCGCCGCCACCGATTACGGATTACATGTACTTCGATCCGTCGGATTCAATCCCGAAGCTGCACACAGACTCGAGCTGTTCGGAGCAGGTGGTTTCACCGGAATTTGCAAACGAGGTGCAGAGCGAGCCGAAGTGGAACGAATGGGAGAAGGGCTTGGAGTTTTCCTATAATTACATAGATGCCACTCTTAGCAACGGCTTCACCCAATTTCCGAGCAATAATAACAATAATATTCAGATGTCGCCGCTGCAGGACATGTTCATGTACTGGCCCAAGTCCTTTTGA 876 0.5194 MTSELQLPPGFRFHPTDEELVMHYLCRKCASQPIAVPIIAEIDLYKYDPWDLPGLASYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGHPKPVGIKKALVFYAGKAPKGDKTNWIMHEYRLADVDRSVRKKNSLRLDDWVLCRIYNKKGTIEKLQPSSDVIMSRKTESSEIEEKKPEILKTGGGLPLAPPPITDYMYFDPSDSIPKLHTDSSCSEQVVSPEFANEVQSEPKWNEWEKGLEFSYNYIDATLSNGFTQFPSNNNNNIQMSPLQDMFMYWPKSF 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01302 291 SUPERFAMILY NAC domain 4 157 IPR036093 GO:0003677|GO:0006355
Spst9g01302 291 Gene3D NAC domain 16 161 IPR036093 GO:0003677|GO:0006355
Spst9g01302 291 Pfam No apical meristem (NAM) protein 8 131 IPR003441 GO:0003677|GO:0006355
Spst9g01302 291 ProSiteProfiles NAC domain profile. 7 157 IPR003441 GO:0003677|GO:0006355
Spst9g01302 291 PANTHER NAC TRANSCRIPTION FACTOR 56 7 213 - -
Spst9g01302 291 FunFam NAC transcription factor 16 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01302 Spst-Chr9 12564388 12565871 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01302 1 291 NAC Transcription Factor Family AT1G01720 71.523 6.22e-150 419
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Spst9g01302 NAM 4.9e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01302 - - gmx:100805768 524.628