Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01285 ATGGACTGCAGTCCTTCCTCCAATGCCGTCCCGCCCCGCCGCAATGATCGCCGGAAGCTGGTTCAATCGACGCTCTTTCCTCTCATGCCACTGGAACCCGTTATGAAAAACCACAAAGAGGAAGAATGCGACGAGGATGACTCCGAGGCTGATAATAACAAAAAGAAGAGGAAGAGACCTAAGGCAAAAGTCACTCATCCAAAAAAGAGTTTTAGTAAGGTAGAATGTGACGAGGATTACTCTGAGGCTGATAATAACAAGAAGAAGAGGAAGAGGCCCAAGGCAAAAGCCACTCCTCCAAAAAAGAGTTATACTAAGCGGAGTGCCACACCAAAGAAAAAGGCAACTGCTAACGGTACTAAGGGATTAACATCGCCGCAGGTGTTAGCTAATTCTGATCAGGTTAAGGCACCCGTCTATGATTTGTTTCTAGAAGCGAAAAAGTCTGCTGAGGTATGTTACTTTTGGCTGGGAGTCTGGGATTTTCTATTGCTTTGCTCTGATGTGATTAAGGGGGATGATGCCTCATCCGTTGATTGGATAAACTGGACGTTCATGGAGAATCCCTCCTTTATGAATTACATTCCAGAGAGTTTAAATTCATCTGTTTTCGAGGGTTATGTTGAATCCTTAAATTTTGATAAGCTTCATAGTCCTTTGAATCCATCAGGCATTTCAATTTCTCAGGATGCCTTATCTTCACATAGACTTTCTATAATTCCAAACAATCTGGAAGAAGTATCACCATCAAACTCGGCTTCACTAGCAGAACATACAGCATGCTATCTGACATTTACCTACTCTCTTTGCATAGCTGTGAACTTGGAGGTGGATGAATCTATTCCTACAACTGTGCTAGCTGGCATTGTTAGCAAGTCTAAAGATACTGAGCGACTGAGTAGGTTTCTTCAAGAAAGGCCAAGAAAGGCTGTTGAGGTTTGTGGTAATGATGAACCTGTGAATTTCTTGCGTGATTGGCTATGTCGTTGGCATGAAAGACGATATAAAAGCAGGAAGGATAACAATTGCCTGGATAAAAGTGACATGCAAGATGTTAATGATGACGATGATTATAAATGTTCTTATAGCGACTATGATTCAGAAGATATAGATGAGAAGGATTCCCTGCAAAAAGTTCTTTTAATTACTGGACCAATTGGGAGTGGCAAGTCATCAGCTGTATATGCTTGTGCCAAAGAGCAAGGGTTTAGCATTTTAGAGCTCAATTCATCACATTCTAGAAATGGGACTGCTATCAGGAACTTGGAAGAATCTCTTACTTCAATTGGGTTCCACAGGCAATCACAAAACAAGGCGAGTTCACAGAAGAACTCTAAAAATTTGCCCCCATCTCCAACTCTGTTCAATGGTGGATCATCATTGAAGTTACTAGGTGAAAATGATGAGTCTGAAAAGTATAAATTCCATCCTCTAGTCCTAGTTGAGGATGTGGACATCCTTTACGCCGAAGATCGTGGATGTATAGCTGCCATACAACAGATTGCTGAGACTTCAAAGGGGCCAATTATATTGACCAGTAATAGTGATAATCCGGGTCTGCCACATAAGTTTGATAGGTTCCATGTTCCATTCGTGTTGCCATCGCCAAAGGAGTTGCTTTCGCATCTGTATACTGTTTGTCTCACTGAAGGAGTCAACATCCATCCTCTTTTAGTGGAGAAGTTTATACATTCTTGTGGTGGAGATATCCGAAAATCCATTATGCATCTTCAGTTCTGGTTTCAGAGTAAAACATTTCAAAAAGATGAAAAATCACAAACAGGTTATGGCTCACTTCCATTTGATCTTGAGCTTGGCCATCAGATTCTACCAAAGATAATGCCCTGGGATTTCCCCTCGGTGATATCTGAACTAATTGAGAATGAATTAACCAAACCAATAAATATAATGGAAGAAAACTCCAGAGGGTTAGTTACAGAAGAGCTTCACGTTAGTGATCGGCAAAAAGATTTAAATGTGAAATGTATGGAGACTGATTATATAGAGGCCAAGAAGGTGGAGATGATTAAGAGGAATGGATCGTTGACAGATTACAGTGAGCTTGAATTTCAATATGACGCTGTTTCTGAGTTTTCCAATTCTGCTGGTTCCCCACTAGCATCCTCCTCTAGGCATAATGGTCGGAGGAAACTTGTAGTTATGTCCTCTGATTCTGAGGACGAGGATTCAAACAATGGATATCCTGAATGCTCACATGATGAAGCTGATACGAGACAATTGATGAAAGAAAATAATGGTTGTCCCTCGGAGTTTCAATTAAAAGGAAACTACCCCGACACATCAATTCACAGGCTAGTTTGTTCCGATTTGGAGCATTCAGATGAAAAATATTTTAAATATTCAGAAACAGCTGATGGTATATACTTAAATGAAACATGTAAATCATTAGATGTATCTTGTGTGCCAGAATCAACGTTTGTTCCTGAAACAGAAATTGAAAATGGAACAGAGGCTATCTCTGGAGCCGTGTCTTCTGACCCTGCTGGCCCTCTTGTCAGTCCTCGAGAGGTATCCGTGAATAATGAGTTGAAACCATTCACTTTCAATGTTCGTAGGCGCTTAACAAAATTGTCACGAAATCCAGATTTGTATGTTGATACTGAAATTCCAGACTATTCTCTTAAAGGGGTTCAGCATGATGTTCAAGATGAACATATGGAACAGATTGTTAAAGTGATGGATGAGTGCAGTCGAATGGATTTCAAACTAAAGCCAACGTTTTTGCAGTCCAATCCATTAGACGAGACAGAAAAGATACAAAAAGTGTGGAGAGATCTCCGCGATGGTCGAATTGATTTGAGACAGCGTTCTACCGCAGATCAGCTTGGTACTTTTCAAGTTGTTAAACTTGCTAGTGGACTGTGCAATCTAATTTCAGACGCAGACTTGTTTCCTAAACGGGACGGAATGGAACCTTCAAGGTTCCTTTCTGACGAAGTCGCATCCAATGGGTATTGGGAACAAATGATGATGTCCACTGTTGCTGAACATGGGTTTTGCTTTTACGCCAAGCTTATATCAGATGAAGGATCAAAATTGGGCTGTGCAAAATGTGTTGATATTACTTCTGAGATGTTGACTTCGTCCACTGATATTATGGCATTGGGGAAATTATCCCGACAGGATCTCACGAAAATGAAAGACTTCCATACTGGAAATGAAGCAGAGTGGAATACCCCAATAAATAATATGCAGAAGAGTGAAAATAAAAAATCTCTGGTCGAGGTCATCCAATCCATTGCTCCTGCAAGAACATCCTTGACATTAAAAGGTGATGGATTCAACGAATATCTATCTTCATTACGCCAAATTTCAAGGTCAGAAGCTTTCCGCATTTCACAAGAGGTTGAAAAGAAGAGAGGAGGAAGGGTACGGGGCGTTCACCATTACTTGAGCATATGTACCACGTTGTCTTCTGAAGATATATCTTTGATGAGCGGTGGTGATCCGTACAGAAAGATTTCTTCACAACATACAACATAG 3504 0.4075 MDCSPSSNAVPPRRNDRRKLVQSTLFPLMPLEPVMKNHKEEECDEDDSEADNNKKKRKRPKAKVTHPKKSFSKVECDEDYSEADNNKKKRKRPKAKATPPKKSYTKRSATPKKKATANGTKGLTSPQVLANSDQVKAPVYDLFLEAKKSAEVCYFWLGVWDFLLLCSDVIKGDDASSVDWINWTFMENPSFMNYIPESLNSSVFEGYVESLNFDKLHSPLNPSGISISQDALSSHRLSIIPNNLEEVSPSNSASLAEHTACYLTFTYSLCIAVNLEVDESIPTTVLAGIVSKSKDTERLSRFLQERPRKAVEVCGNDEPVNFLRDWLCRWHERRYKSRKDNNCLDKSDMQDVNDDDDYKCSYSDYDSEDIDEKDSLQKVLLITGPIGSGKSSAVYACAKEQGFSILELNSSHSRNGTAIRNLEESLTSIGFHRQSQNKASSQKNSKNLPPSPTLFNGGSSLKLLGENDESEKYKFHPLVLVEDVDILYAEDRGCIAAIQQIAETSKGPIILTSNSDNPGLPHKFDRFHVPFVLPSPKELLSHLYTVCLTEGVNIHPLLVEKFIHSCGGDIRKSIMHLQFWFQSKTFQKDEKSQTGYGSLPFDLELGHQILPKIMPWDFPSVISELIENELTKPINIMEENSRGLVTEELHVSDRQKDLNVKCMETDYIEAKKVEMIKRNGSLTDYSELEFQYDAVSEFSNSAGSPLASSSRHNGRRKLVVMSSDSEDEDSNNGYPECSHDEADTRQLMKENNGCPSEFQLKGNYPDTSIHRLVCSDLEHSDEKYFKYSETADGIYLNETCKSLDVSCVPESTFVPETEIENGTEAISGAVSSDPAGPLVSPREVSVNNELKPFTFNVRRRLTKLSRNPDLYVDTEIPDYSLKGVQHDVQDEHMEQIVKVMDECSRMDFKLKPTFLQSNPLDETEKIQKVWRDLRDGRIDLRQRSTADQLGTFQVVKLASGLCNLISDADLFPKRDGMEPSRFLSDEVASNGYWEQMMMSTVAEHGFCFYAKLISDEGSKLGCAKCVDITSEMLTSSTDIMALGKLSRQDLTKMKDFHTGNEAEWNTPINNMQKSENKKSLVEVIQSIAPARTSLTLKGDGFNEYLSSLRQISRSEAFRISQEVEKKRGGRVRGVHHYLSICTTLSSEDISLMSGGDPYRKISSQHTT 1167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01285 1167 FunFam p-loop containing nucleoside triphosphate hydrolase superfamily protein 536 597 - -
Spst9g01285 1167 Gene3D - 306 527 IPR027417 -
Spst9g01285 1167 MobiDBLite consensus disorder prediction 89 109 - -
Spst9g01285 1167 MobiDBLite consensus disorder prediction 110 126 - -
Spst9g01285 1167 MobiDBLite consensus disorder prediction 34 55 - -
Spst9g01285 1167 Gene3D - 534 597 - -
Spst9g01285 1167 MobiDBLite consensus disorder prediction 432 453 - -
Spst9g01285 1167 PANTHER CELL CYCLE CHECKPOINT PROTEIN RAD17 6 1164 IPR004582 GO:0006281
Spst9g01285 1167 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 306 588 IPR027417 -
Spst9g01285 1167 MobiDBLite consensus disorder prediction 68 88 - -
Spst9g01285 1167 MobiDBLite consensus disorder prediction 1 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01285 Spst-Chr9 12310903 12320022 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01285 306 579 Core DNA Replication Machinery Family AT5G22010 22.887 5.01e-09 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01285 K26118 - gmx:100784209 1405.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01285 9 12310903 12320022 Spst9g01285 9 12310903 12320022 ECH