Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01281 ATGGAGGATCAAAATGGTGGTGGTAAGTTAAGCCAAGGGCTTCGGAAGTTGAAGCCTTATCTTGCTATATTGTCCCTTCAGTTTGGCTACTCAGGGATGTATATCATCACTATGGTTTCTTTCAAGCATGGCATGAGTCATTGGATACTCTCAGTGTACCGTCATATAGTTGCTGCTATTATAATAGTGCCTTTTGCACTTGTCCTTGAAAGAAAAATAAGACCAAAGATGACTCTTACCATCTTCTTGAGGATAGTGGCACTTGGTTTCCTTGAGCCAGTGCTGGATCAGAACTTGTACAACATGGGGATGAAGATGACTTCAACAACGTTTGCATCCGCCACAGTTAATGTCCTCCCGGCCATTACTTTTATAATGGCACTCATTTTCAGACTGGAGAAGGTGAACTTGAGAAAATTTCACAGCCTAGCGAAGGTCATTGGAACGGTTATAACAGTTTCAGGAGCAATGGTTATGACTCTGTACAAAGGCCCTGCCTTCCAAATCATAAAGGGTGGAGGAGCCATCAGCCACCATAGCAACTCTAGCAGTAGTTCCACTGAACCCTCTGATCAACACTGGGTGGTTGGCACAGTCTATCTTATATCAAGTTGTGCCAGTTGGGCTGGTTTCTTCATTTTGCAATCATTCACTTTGAAGAAGTACCCAGCAGAGCTCTCACTCACAGCATGGATTTGCGTAATGGGTATCATTGAGGGTTCAATCGCATCCCTTATATTCGAAAGAGACTTTAGTGTATGGGTCATAGGCTGGGACTCAAGGCTTCTTGCTTGTGTGTATTCTGGAGTGATTTGTTCCGGAATGGCATACTATGTACAAGGGGTTGTAACCAGGGAACGTGGACCAGTGTTTGTGACATCTTTCAGCCCTCTATGTATGATTATCACCGCTGCATTGGGTTCCCTTGTCTTAGCTGAGCAAGTTCATCTTGGAAGCATATTTGGGGCTATTCTGATTGTGTGCGGACTTTACACTGTGGTGTGGGGCAAAAGCAAAGACCGTAAGAACACAACAGATATAGGGAAAGAAACAAGGCAAGAATTGCCAATAAAGGACGGTACAAAACCAGCGTCAGACATTTTTGAAGGCCTTGAGATCGATGTTCCTGTTGAGGTGTTGAAGAAAGGTGTCCCACCAACAACAACATCATCATCATGA 1179 0.4402 MEDQNGGGKLSQGLRKLKPYLAILSLQFGYSGMYIITMVSFKHGMSHWILSVYRHIVAAIIIVPFALVLERKIRPKMTLTIFLRIVALGFLEPVLDQNLYNMGMKMTSTTFASATVNVLPAITFIMALIFRLEKVNLRKFHSLAKVIGTVITVSGAMVMTLYKGPAFQIIKGGGAISHHSNSSSSSTEPSDQHWVVGTVYLISSCASWAGFFILQSFTLKKYPAELSLTAWICVMGIIEGSIASLIFERDFSVWVIGWDSRLLACVYSGVICSGMAYYVQGVVTRERGPVFVTSFSPLCMIITAALGSLVLAEQVHLGSIFGAILIVCGLYTVVWGKSKDRKNTTDIGKETRQELPIKDGTKPASDIFEGLEIDVPVEVLKKGVPPTTTSSS 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01281 392 SUPERFAMILY Multidrug resistance efflux transporter EmrE 258 339 - -
Spst9g01281 392 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 161 - -
Spst9g01281 392 PANTHER WAT1-RELATED PROTEIN 19 341 IPR030184 GO:0016020|GO:0022857
Spst9g01281 392 Pfam EamA-like transporter family 197 334 IPR000620 GO:0016020
Spst9g01281 392 Pfam EamA-like transporter family 28 152 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01281 Spst-Chr9 12272633 12275935 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01281 7 377 Nodulin-like Gene Family AT4G08300 64.987 4.76e-173 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01281 - - gmx:100783910 699.123