Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01280 ATGGTTGCGTGGTTCACAAATGCAAGGCCCTATCTCATGTTGTTGGCGGTTCAGTTTGGGTCTGCTGGCATGTTCATATTTGCCATGGATGCTATCAAGAAGGGTATGAGCCATTACGTCTTCATCGTCTACCGTAATTCCATCGCTTCTATAACTCTCGCTCCCTTCGCCTTTGTTCTTGAAAGGAAAGTTAGGCCCAAGATGACTCTTCGCATATTTTCAGAGATTATGGCACTGGCTTTCTTCGAAATAATACTGGATCAGTGCTTCGCCCTCTTGGGCATGAAATTCACGTCTGCATCTTTCCTCTCTGCTGTCATGAACTCCGCTCCCTCTGTTACTTTTGTCATGGCTGTCATTCTAAGGTTGGAGCACATGAAGATGAAGGAGGTGGCAAGTCAAGCCAAATTGATTGGAACAATTGTAACTTTTGGAGGCACCTTGCTAATGGCACTATACAAAGGCCCTGTACTTAGTGTTATGAGATCTTCAACAAGCCATGCTGGCCAACCTCAGAATGTGAACAGCCCCACCGCTAACCACTGGATCCTGGGGACATGTGCACTTCAAAGCTCTGTTGTAGCAGCCATCGCAGAACGCCACCACCCTCATGCATGGGCCCTTGGTTGGGATACACGACTCTTTGCTCCTGCTTACGCGGGAATAGTTACATCAGGAGTTCAGTATTACATACAAGGCATGGTGATAAAATCCATGGGCCCAGTTATTGTGACTGCTTTTAATCCCCTTCGTATGATCATTATTACCACCTTGGCCTGCATCATCCTATCTGAGCAACTCTACCTTGGAAGTGTCGTTGGAGCAATAGTTGTGGTTCTTGGGCTATATCTGGTTGTGTGGGGAAAATCAAAAGAATGCCAGCGAAGAATGCCACCATCCCCTGCAAAAGATAACTTTCCAGAAGAGCAACAGCTACCTATCACAGCTCCCAGGAATGATGGCAATAACAACAAGGTGAGATCCGTTCTGATTGTCAGCACTGATTTGACTTCAGACAGATTGATACATGCTAGCGTTCTATATTCTCATTCATGGAAGAATATGAATAAACCAAACACTAAAGAGAAAGGTGAATGTCTTAAGGCTAATTGTCTAACGCCAGAAGCTGTTCAGAAGGCTTCTAGTAGGAATATGAATGTTTGTTTTGGAAAATGGGTGAGGGAGAATCATCGGAGTGGAAATTGA 1206 0.4502 MVAWFTNARPYLMLLAVQFGSAGMFIFAMDAIKKGMSHYVFIVYRNSIASITLAPFAFVLERKVRPKMTLRIFSEIMALAFFEIILDQCFALLGMKFTSASFLSAVMNSAPSVTFVMAVILRLEHMKMKEVASQAKLIGTIVTFGGTLLMALYKGPVLSVMRSSTSHAGQPQNVNSPTANHWILGTCALQSSVVAAIAERHHPHAWALGWDTRLFAPAYAGIVTSGVQYYIQGMVIKSMGPVIVTAFNPLRMIIITTLACIILSEQLYLGSVVGAIVVVLGLYLVVWGKSKECQRRMPPSPAKDNFPEEQQLPITAPRNDGNNNKVRSVLIVSTDLTSDRLIHASVLYSHSWKNMNKPNTKEKGECLKANCLTPEAVQKASSRNMNVCFGKWVRENHRSGN 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01280 401 SUPERFAMILY Multidrug resistance efflux transporter EmrE 207 290 - -
Spst9g01280 401 PANTHER WAT1-RELATED PROTEIN 10 189 IPR030184 GO:0016020|GO:0022857
Spst9g01280 401 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 154 - -
Spst9g01280 401 MobiDBLite consensus disorder prediction 294 321 - -
Spst9g01280 401 Pfam EamA-like transporter family 10 150 IPR000620 GO:0016020
Spst9g01280 401 Pfam EamA-like transporter family 173 286 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01280 Spst-Chr9 12261417 12272422 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01280 9 326 Nodulin-like Gene Family AT1G44800 38.655 4.14e-88 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01280 - - gmx:102665912 551.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01280 9 12261417 12272422 Spst9g01280 9 12261417 12272422 ECH