Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01279 ATGCGTACGTGGTTCACAAATGCAAAGCCGTATCTGCTGTTATTGGCCGTTCAATTTGGCTCTGCCGGCATGTTCATTTTCGCCATGGATGCCATGAAGAAGGGCATGAGCCATTACGTCTTCACCGTCTACCGTAATCTCATCGCCTTTCTTACTCTCTCTCCCTTTGCATTTGTTCTTGAAAGGAAAGTCAGGCCCAAGATGACTCTTCGCATATTTTCAGAGATTGTGGCACTGGCTTTCTTCGAAATAATACTGGATCAGTGCTTCGCCCTCTTGGGCATGAAATTTACGTCTGCATCTTTCCTCTCTGCTGTAATGAACTCTGCACCCTCGGTTACTTTTGTGATGGCTGTAATTCTTAAATTGGAACACATGAAGATGAAGGAGACAACATGTAAAGCAAAAGTTATTGGAACAATTGTAACTTTCGGAGGCACTTTGCTAATGGCACTATACAAAGGCCCGGCACTTAGTGTGATGAGATCTTCAACCAGCCATGGTAGCCAACCTGAGAACGTGAACAACTCCACTGGTAACCACTGGGTCATAGGGACATGTTTCCTCCTTATTGGTTGTGCAGGTTTTTCCGCGTTTTACATATTACAAGTCATAACATTGAGAAAATACCCAGCAGAGATGTCCCTGGCTACTTGGGTTTGCTTTGTAGGTGCACTTCAAAGTTCTATCGTGGCATTCTTCGCGGAGCACCACCACTCTCATGCTTGGTCCATTGGTTGGGATACAAGACTCTTTGCTCCTGCTTACGCGGGAATAGTTTCATCCGGAGTTCAGTATTACATACAAGGCGTGGTGATAAAATCCATGGGCCCTGTTATTGTGACTGCTTTTAATCCCCTTCGTATGATCATCATTACCACCTTGGCCTGCATCGTCCTCTCTGAAAAACTCTACCTTGGAAGTATTATTGGAGCAGTAGTTGTGGTTCTTGGGCTGTATCTTGTTGTGTGGGGAAAATCTAAAGAATGCCAGCAAAGAATAATGCCACCCAACCCTGGAAATGATAACTCTACAGAAGACCAACGACAGCTACCAGTCACAGCTCCTAGGAATAATAGTGATGATAATAAGGCTTAA 1098 0.4454 MRTWFTNAKPYLLLLAVQFGSAGMFIFAMDAMKKGMSHYVFTVYRNLIAFLTLSPFAFVLERKVRPKMTLRIFSEIVALAFFEIILDQCFALLGMKFTSASFLSAVMNSAPSVTFVMAVILKLEHMKMKETTCKAKVIGTIVTFGGTLLMALYKGPALSVMRSSTSHGSQPENVNNSTGNHWVIGTCFLLIGCAGFSAFYILQVITLRKYPAEMSLATWVCFVGALQSSIVAFFAEHHHSHAWSIGWDTRLFAPAYAGIVSSGVQYYIQGVVIKSMGPVIVTAFNPLRMIIITTLACIVLSEKLYLGSIIGAVVVVLGLYLVVWGKSKECQQRIMPPNPGNDNSTEDQRQLPVTAPRNNSDDNKA 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01279 365 Pfam EamA-like transporter family 184 323 IPR000620 GO:0016020
Spst9g01279 365 Pfam EamA-like transporter family 9 151 IPR000620 GO:0016020
Spst9g01279 365 MobiDBLite consensus disorder prediction 334 365 - -
Spst9g01279 365 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 154 - -
Spst9g01279 365 PANTHER WAT1-RELATED PROTEIN 9 335 IPR030184 GO:0016020|GO:0022857
Spst9g01279 365 MobiDBLite consensus disorder prediction 333 365 - -
Spst9g01279 365 SUPERFAMILY Multidrug resistance efflux transporter EmrE 221 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01279 Spst-Chr9 12252773 12254936 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01279 9 362 Nodulin-like Gene Family AT1G44800 43.575 5.90e-104 309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01279 - - gmx:100776215 630.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01279 9 12252773 12254936 Spst9g01279 9 12252773 12254936 ECH