Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01278 ATGGGTACGTGGTTCACAAATGCAAGGCCCTATCTGCTGTTATTGGCTGTTCAATTTGGGTCTGCTGGCATGTTCATATTTGCCATGGATGCTATCAAGAAGGGTATGAGCCATTACGTCTTCATCGTCTACCGTAATGCCATCGCCTCTGTTACTCTCGCTCCCTTCGCCTTTGTTCTTGAAAGGAAAATTAGGCCGAAGATGACTTTCAGGGTATTTTCAGAGATTATGGCACTGGCTTTCTTCGAAATAATACTGGATCAGTGCTTCGCTCTCTTGGGCATGAAATTCACGTCTGCTTCTTTTCTTTCTGCTGTCATGAATTCCGCTCCCTCCATTACTTTTGTCATGGCAGTCATTCTAGGATTGGAGCACATGAAGATTAAGGAGGTAGCATGTCAAGCCAAAGTGATTGGCACAGTAGTAACGTTCGGAGGCACCTTGCTTATGGCACTGTACAAAGGCCCCGTACTTAGTTTCATGAGATCTACGACCAGCCAGGCTAGCCAAACTGAGAACGCGACCAACCCCACTGGCAACCATTGGGTCATAGGGACAGTGTTCCTCCTCATAGGTTGTGCAGGATTTTCTGCATTTTACATATTACAGGCCATAACATTGAGAAAATACCCAGCAGAGATGTCGTTGGCCACTTGGGTTTGCTTTGTAGGGGCACTTCAAAGTTCTGTTGTTGCAATCTTCGCAGAACGCCACCATCCTCATGCTTGGTCCCTCGGTTGGGACACACGACTCTTTGCTCCTGCTTACGCGGGAATAGTTACATCTGGAGTTCAGTATTACATACAAGGCATGGTGATAAAAACCATGGGTCCAGTTATAGTGACTGCTTTTAATCCTCTGCGTATGATTATTGTTACGGGCTTGGCCTGCATCATCCTATCTGAGCAACTCTACCTTGGAAGTCTTATTGGAGCAATAGTTGTGGTTCTGGGGCTTTACCTAGTAGTGTGGGGAAAAGCTAAAGAACGTAGAGGAATGATGTCACCATCCCCTGCAGAGGATAACTTTCCAGAAGACCAACTACAGCTACCAGTATCAGCTCCAAGGAATGATAGCAACAACAATAAGGCTTAA 1095 0.4594 MGTWFTNARPYLLLLAVQFGSAGMFIFAMDAIKKGMSHYVFIVYRNAIASVTLAPFAFVLERKIRPKMTFRVFSEIMALAFFEIILDQCFALLGMKFTSASFLSAVMNSAPSITFVMAVILGLEHMKIKEVACQAKVIGTVVTFGGTLLMALYKGPVLSFMRSTTSQASQTENATNPTGNHWVIGTVFLLIGCAGFSAFYILQAITLRKYPAEMSLATWVCFVGALQSSVVAIFAERHHPHAWSLGWDTRLFAPAYAGIVTSGVQYYIQGMVIKTMGPVIVTAFNPLRMIIVTGLACIILSEQLYLGSLIGAIVVVLGLYLVVWGKAKERRGMMSPSPAEDNFPEDQLQLPVSAPRNDSNNNKA 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01278 364 MobiDBLite consensus disorder prediction 334 364 - -
Spst9g01278 364 SUPERFAMILY Multidrug resistance efflux transporter EmrE 220 328 - -
Spst9g01278 364 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 154 - -
Spst9g01278 364 PANTHER WAT1-RELATED PROTEIN 10 334 IPR030184 GO:0016020|GO:0022857
Spst9g01278 364 Pfam EamA-like transporter family 10 150 IPR000620 GO:0016020
Spst9g01278 364 Pfam EamA-like transporter family 184 323 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01278 Spst-Chr9 12244684 12248102 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01278 7 357 Nodulin-like Gene Family AT2G37460 44.886 4.95e-109 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01278 - - gmx:100811984 652.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01278 9 12244684 12248102 Spst9g01278 9 12244684 12248102 ECH