Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01277 ATGGAACAAAAATGTTGTTGTGCCAGTTTTGGAAAGAACTTCAGTAAGGCAAAGCCTTTTTTGTTAACGGTGGGACTTCAATTTGGGTTCGCCGGAGCATACATCTTTTCCATCGCCAGTCTCAACCATGGAATGAATCGTTATGTTTTCGTTGTCTATCGTAATGTCATCGCTGCCTTGGCCCTCGCTCCTTTTGCATTGATTTTTGAGAGGAAAATTAGGCCAAAGATAACACTCCCTGTCTTCTTGCAGATAATGGCACTCGGATTTGTGGAGCCAGTGATTGACCAAGGGTTCACTTTCTTGGGAATGCAATATACATCAGCTTCATTTGCTTCTGTTATAATGAATGCCGTGCCTTCTGTCACTTTTGTGCTAGCCGTAGTTCTAAGGTTAGAGCGTGTAAATGTTCAGGAAATACGGAGCCTAGCAAAGGTGATTGGGACATTGGTAACATTTGCAGGTGCTTTGTTAATGACACTTTACAAAGGTCCTGAATTTAACCTATTTCATTCTGCAAACACAACCCACCACCAAGATGGAAGTAACTCCCCTCAAGTTGTCAAACACTGGGTCTCTGGGACTCTCTTTCTTCTCCTGGGTTGTGTGGCTTGGTCATCTTTCTTCATTTTACAGTCCATAACATTGAAAAGGTATCCGGCAGAATTGTCTCTCTCTTCATTGGTCTGCGTATCGGGTGCTGCGCAAGCTAGCGTGGTGGCAATTGTGGCCACTCGTCATTCTGGGCTTGCGGCATGGGCCTTAGGTTGGGACTTCAGACTCTACGGTCCACTCTACACGAGCAACTTCACTTGGGCAGAGCAGGGACCAAGGGAAGAAGAGATAAAAAAGCAGAAAATGATACGTAAGGCAAAATACTTGGCTACAATTAAGTCAAGTTTGGCGAAAGCCTTAGCTGATTTGAGAGAGTTTATGTTTGACACGACATTAAGCAGTAAACTTGGTGTTTTTAGCTCCATTCCTTAG 987 0.4407 MEQKCCCASFGKNFSKAKPFLLTVGLQFGFAGAYIFSIASLNHGMNRYVFVVYRNVIAALALAPFALIFERKIRPKITLPVFLQIMALGFVEPVIDQGFTFLGMQYTSASFASVIMNAVPSVTFVLAVVLRLERVNVQEIRSLAKVIGTLVTFAGALLMTLYKGPEFNLFHSANTTHHQDGSNSPQVVKHWVSGTLFLLLGCVAWSSFFILQSITLKRYPAELSLSSLVCVSGAAQASVVAIVATRHSGLAAWALGWDFRLYGPLYTSNFTWAEQGPREEEIKKQKMIRKAKYLATIKSSLAKALADLREFMFDTTLSSKLGVFSSIP 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01277 328 Pfam EamA-like transporter family 28 160 IPR000620 GO:0016020
Spst9g01277 328 PANTHER WAT1-RELATED PROTEIN 18 268 IPR030184 GO:0016020|GO:0022857
Spst9g01277 328 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01277 Spst-Chr9 12223813 12229086 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01277 16 267 Nodulin-like Gene Family AT4G08290 60.079 3.17e-109 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01277 - - vum:124847038 487.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01277 9 12223813 12229086 Spst9g01277 9 12223813 12229086 ECH
Spst9g01277 9 12223813 12229086 Spst3g04600 3 97799847 97801997 ECH
Spst9g01277 9 12223813 12229086 Spst1g00104 1 1632502 1638237 ECH