Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01266 ATGGAAGTACATATGGACATGGACATAGACATAGATTTTATCCACAACCTTCACTTCTCTCCAGACACCACCAACACCACCCCCTCTTCCGACGACGACTACGGTTGCAACTGGAACCACTGGTCACCCCTCGTCAACTGGGATGCCTTCACCGGACCCCACGACGACTTCCACCACCTCATCGACTCCATCGTGTGCGACGCCGCTGCCCCCGAGTACCCCAGCCCCGACGACCACGGCGCCAGCAACTCCCCCTCCGCCTCCATCACTGAGGAAGACGACGCCGAGGAAGAAACCGCCGCCGCCGACGATTCCAAGGGTCTGAGACTCGTCCATCTGCTCATGGCCGCCGCGGAGGCCCTCACCGGCGCCACCAAGAGCCGCGACCTGGCTCGAGTGATATTGGTTCGGCTCAAGGAGTTGGTGTCCCACGCGGCGCACGGCTCCAACATGGACAGGCTCGCCGCGTACTTCACCGACGCACTCCAGGGCCTGCTAGAAGGCGCCGGCGGTGCGCACAGTAACGGCAAACATCAATACTACATGACGTGTGGGTCCCATCACCCCCGCGACGATCATCATCATCAAAACGACACCCTGGCGGCGTTCCAACTGCTCCAGGACATGTCTCCCTACGTCAAATTCGGACACTTCACCGCCAACCAAGCCATCCTCGAGGCCGTGGCCCACGAGCGCCGAGTCCACATCGTAGACTACGACATCATGGAAGGGGTCCAGTGGGCCTCCCTCATGCAGGCCCTCGCCTCCAACAAAACAGGCCCACCGGGCCCACACCTCCGAATCACTGCATTGTCCCGAACCGGCGCCGGACGCCGCTCCATCGCCACCGTGCAGGAGACCGGCCGCCGATTGACAGCATTCGCCGCCTCCCTCGGCCAGCCGTTCTCGTTCCACCAGTGCAGGTTGGACCCCGATGAAACGTTCAAAACTTCGTCTCTGAAGCTGGTTCGCGGAGAGGCGTTGATCTTTAACTGCATGCTAAACTTACCGCACCTGAGTTACCGCGCGCCCGATTCCGTTGCGTCGTTTTTGAGTGGAGCGAAAGAGTTGAAGCCGAGGCTTGTGACTTTGGTGGAGGAGGAGGTAGGGTCTAGTGTGGGGGGCTTCGTGGGAAGGTTCATGGACTCGCTGCATCACTACTCCGCGGTGTTTGACTCGCTGGAGGCTGGGTTTCCGATGCAGGGGCGGGCCAGGGCCCTTGTAGAGCGGGTTTTCTTCGGCCCAAAGATAGTGGGCTCGTTGGCGCGGATATACCGGACAGGCGAAGAGCTGGAGGAGAGAGGGTCGTGGGGGGAGTGGTTGGGTGCGGCGGGGTTCAGGGGAGTTCCGATGAGCTTCGCAAATCATTGCCAAGCGAAGCTTTTACTGGGTCTTTTCAACGACGGATATAGGGTGGAGGAGTTGGGGACTAATAAGTTAGTGTTGGATTGGAAATCTCGGCGCTTGCTTTCTGCATCACTTTGGACTTCTTCTTCCTCAGACACTCATTAA 1512 0.5952 MEVHMDMDIDIDFIHNLHFSPDTTNTTPSSDDDYGCNWNHWSPLVNWDAFTGPHDDFHHLIDSIVCDAAAPEYPSPDDHGASNSPSASITEEDDAEEETAAADDSKGLRLVHLLMAAAEALTGATKSRDLARVILVRLKELVSHAAHGSNMDRLAAYFTDALQGLLEGAGGAHSNGKHQYYMTCGSHHPRDDHHHQNDTLAAFQLLQDMSPYVKFGHFTANQAILEAVAHERRVHIVDYDIMEGVQWASLMQALASNKTGPPGPHLRITALSRTGAGRRSIATVQETGRRLTAFAASLGQPFSFHQCRLDPDETFKTSSLKLVRGEALIFNCMLNLPHLSYRAPDSVASFLSGAKELKPRLVTLVEEEVGSSVGGFVGRFMDSLHHYSAVFDSLEAGFPMQGRARALVERVFFGPKIVGSLARIYRTGEELEERGSWGEWLGAAGFRGVPMSFANHCQAKLLLGLFNDGYRVEELGTNKLVLDWKSRRLLSASLWTSSSSDTH 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01266 503 MobiDBLite consensus disorder prediction 71 103 - -
Spst9g01266 503 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 94 491 IPR005202 -
Spst9g01266 503 ProSiteProfiles GRAS family profile. 101 496 IPR005202 -
Spst9g01266 503 Pfam GRAS domain family 110 496 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01266 Spst-Chr9 12029481 12030992 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01266 96 499 GRAS Transcription Factor Family AT3G54220 36.829 2.23e-55 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Spst9g01266 GRAS 8.7e-101 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01266 - - gmx:100787926 800.816
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01266 9 12029481 12030992 Spst9g01266 9 12029481 12030992 ECH