Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01265 ATGATATGGGAAGCAGAAGCATGCCAGAAAAAAAAATTGAAACCACAAAAGCTGACCGATTCCACCCCTTCTACCTTTCTCAATTCCAAGGCCATTTACTTGTCTCGATTCTGCATTTCTTCAAATTACACCATGAAACGTATCATTACTCTCTCTTGCATTTTCCTTTTGTTTACTACCATTTCGGCTCGCACTTTTTCAGATTATATCACTCCAAATTTCTCTGCCTCATATCTTAATTTCATCGATGGCTTTGGCACCTTCCTGTTGTCTCACAACAACACATTCAAGGCTGCTATATTCAACCCCGGTGGTCAGCAAACCAGATTCTATCTGTGTGTCATTCATGCTGCGTCCAACACTATCATTTGGTCTGCTAACCGTGATGCCCCCATCTCAGATTCTGGAAAAATGCTTCTGACTGTCCAAGGGATCACAATTCTCAACGAAGATGGGAACACCAAATGGTCAACACCATCGCTGAAATCACAAGCAGATAGGCTTGTGCTGACCGAGATGGGAAATCTGGTCTTACTGGATAAGTCCAATGGTTCTCTCTGGGAGAGTTTCCAAAGCCCAACTGACACAATTGTTATTGGACAGCGTTTACCTGTAGGAGCATCTTTGTCAAGTGCAGCATCCAATTCAAACTTGTCAACAGGAAATTACAAGCTCACAATTTCTTCCTCTGATGCAGTGCTGCAATGGTATGGACAGACCTACTGGAGACTTTCATCGGATACAAAAATCTATAAGAATTCAAATTCTATGGTGGAGTACATGGCCGTAAACAACTCAGGTTTTTATCTATTTGGAGCTAGTGGAACAGATTTTCAACTGGGACTGCCACTGACTAATTTTCGAGTTGCCCAATTGGGTACCTCTGGACAGTTCACTATCAACAGCTTTTCTGGCACTGGCTTAAAGCAGGAATTTGTGGGTCCAGGTGATGGTTGTCAAACTCCCTTGGCTTGTGGAAGAGCAGGGTTATGCACTCAGGACCCTGTTTCCTCTACACCTGTTTGTTCTTGTCCCCCAAACTTCAATGTAGACTCAGGTACTTCTGGTGGTTGCGTGCCAAGCAATGAATCCTATTCTTTGCCACTTGCTTGCAAAAATTCTTCAGTTGTTTCATTTTTGAATATAGGGAATGTTCAATACTTTGCCACTTTTTACTCTGATCCAGATATGTATAATGGGAATTTATCTGCCTGTCAAAATCTTTGTTCCAATAACTGTTCCTGCTTGGGAATTTTATATAAAGACACATCTGGTTCTTGTTACATGATTGAGAATGAGTTGGGGTCCATTCATTCAAGTAATGGAGGTGACACAGACATGTTGGGATTCATTAAAAGTAACGTTGTTGAATCTAGTGCTAGTAATAATGATAATAATGGTGACAAGCAAAGTTCTCAAAATGGGGGGTTTCCTGTGGCACTTGCGGTGCTGTTACCTATTATTGGATTCATTACTGTGATGGCCATAATTTTCCTTGTGTGGAGAAGATTGATTCTCATGTCAAAGATGAAAGAAGTGAATCTGGAGAAAAACTCACCTTCTTCAGGCGACCTGGATGCCTTCTACATTCCTGGCTTACCTGCCAGGTTTGACTATGAAGAGCTTGAGGAGGCTACAGAAAACTTCAAGACTCTTATAGGGTCAGGTGGGTTTGGAACTGTGTACAAAGGTGTGCTTGCTGACAAATCTGTTGTGGCAGTAAAGAAAATAGTGAATATAGGCATCCAAGGGAAGAAAGATTTCTGCACTGAGATTGCTGTCATTGGAAACATCCACCACGTTAACTTGGTCAAACTGAAAGGCTTCTGTGCTCAAGGGAGACACCGCTTGTTGGTTTATGAGTACATGAACCGTGGATCCCTTGACCGAAACCTCTTCGGTGGTGGACCCGTTTTAGAATGGCAAGAGAGGTTTGATGTGGCGCTTGGAACAGCACGTGGACTTGCTTACCTTCACAGTGGCTGTGAGCAAAAGGTTATCCATTGTGACATCAAACCCGAGAACATTCTCTTGCAGGATCAGTTTCAGGCTAAGATATCTGATTTTGGACTCTCCAAACTCCTCAGCCCCGAACAGTCTGGTTTGTTCACAACAATGAGAGGCACGCGTGGTTATCTTGCTCCAGAGTGGCTCACCAACTCTGCCATTACAGAAAAAACTGATGTGTATAGCTTTGGAATGGTGCTTCTTGAACTTGTCAGTGGAAGGAAGAACTGTTATTTCAGGTCGAGAAGCCATAGCATGGATGAGAGCAACAGTGGTGGAGGCCATTCCTCGACCTCATCAACAACTGGGTTGGTTTATTTTCCTCTATTTGCATTGGAGATGCATGAGCAAAAGAGTTACCTGGAGTTGGCTGATCCAAGGCTAGAAGGACGTGTCACAAATGAAGAAGTGGAGAAACTGGTTCGCATAGCCTTGTGTTGCGTTCATGAAGAACCTGCACTGAGGCCAAACATGGTCAATGTTGTTGGCATGTTGGAAGGAGGAACTCCATTGCCAAAGCCGAGGATAGAATCTTTGAACTTCCTGAGGTTTTATGGGCGTAGGTTTACCGAGGCTTCCACTATAGCGGAAGAAAATGAGCATGGTTCTTTGATTCATCAAGAAGCACGTAGATCTATATTTAGCATGCCAAGTGATTCACCGATTCATGATTTTTCTTACATGTCTTCACAAAATATCTCAGGGCCAAGATAG 2721 0.4307 MIWEAEACQKKKLKPQKLTDSTPSTFLNSKAIYLSRFCISSNYTMKRIITLSCIFLLFTTISARTFSDYITPNFSASYLNFIDGFGTFLLSHNNTFKAAIFNPGGQQTRFYLCVIHAASNTIIWSANRDAPISDSGKMLLTVQGITILNEDGNTKWSTPSLKSQADRLVLTEMGNLVLLDKSNGSLWESFQSPTDTIVIGQRLPVGASLSSAASNSNLSTGNYKLTISSSDAVLQWYGQTYWRLSSDTKIYKNSNSMVEYMAVNNSGFYLFGASGTDFQLGLPLTNFRVAQLGTSGQFTINSFSGTGLKQEFVGPGDGCQTPLACGRAGLCTQDPVSSTPVCSCPPNFNVDSGTSGGCVPSNESYSLPLACKNSSVVSFLNIGNVQYFATFYSDPDMYNGNLSACQNLCSNNCSCLGILYKDTSGSCYMIENELGSIHSSNGGDTDMLGFIKSNVVESSASNNDNNGDKQSSQNGGFPVALAVLLPIIGFITVMAIIFLVWRRLILMSKMKEVNLEKNSPSSGDLDAFYIPGLPARFDYEELEEATENFKTLIGSGGFGTVYKGVLADKSVVAVKKIVNIGIQGKKDFCTEIAVIGNIHHVNLVKLKGFCAQGRHRLLVYEYMNRGSLDRNLFGGGPVLEWQERFDVALGTARGLAYLHSGCEQKVIHCDIKPENILLQDQFQAKISDFGLSKLLSPEQSGLFTTMRGTRGYLAPEWLTNSAITEKTDVYSFGMVLLELVSGRKNCYFRSRSHSMDESNSGGGHSSTSSTTGLVYFPLFALEMHEQKSYLELADPRLEGRVTNEEVEKLVRIALCCVHEEPALRPNMVNVVGMLEGGTPLPKPRIESLNFLRFYGRRFTEASTIAEENEHGSLIHQEARRSIFSMPSDSPIHDFSYMSSQNISGPR 906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01265 906 ProSiteProfiles EGF-like domain profile. 315 354 IPR000742 -
Spst9g01265 906 SUPERFAMILY alpha-D-mannose-specific plant lectins 112 244 IPR036426 -
Spst9g01265 906 Gene3D Phosphorylase Kinase; domain 1 528 622 - -
Spst9g01265 906 ProSitePatterns Serine/Threonine protein kinases active-site signature. 666 678 IPR008271 GO:0004672|GO:0006468
Spst9g01265 906 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 86 191 - -
Spst9g01265 906 CDD STKc_IRAK 553 836 - -
Spst9g01265 906 CDD PAN_AP_plant 368 452 - -
Spst9g01265 906 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 79 843 - -
Spst9g01265 906 FunFam serine/threonine-protein kinase PBS1-like 516 622 - -
Spst9g01265 906 ProSiteProfiles Protein kinase domain profile. 547 845 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g01265 906 CDD B_lectin 86 193 IPR001480 -
Spst9g01265 906 Gene3D Transferase(Phosphotransferase) domain 1 623 839 - -
Spst9g01265 906 ProSitePatterns Protein kinases ATP-binding region signature. 553 576 IPR017441 GO:0005524
Spst9g01265 906 SMART serkin_6 547 834 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g01265 906 SUPERFAMILY Protein kinase-like (PK-like) 525 834 IPR011009 -
Spst9g01265 906 ProSiteProfiles Bulb-type lectin domain profile. 73 191 IPR001480 -
Spst9g01265 906 PIRSF SRK 41 887 IPR024171 GO:0004674
Spst9g01265 906 Pfam Protein kinase domain 550 753 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g01265 906 SMART blect_4 80 193 IPR001480 -
Spst9g01265 906 Pfam D-mannose binding lectin 121 204 IPR001480 -
Spst9g01265 906 Gene3D - 84 191 IPR036426 -
Spst9g01265 906 FunFam Serine/threonine-protein kinase 623 842 - -
Spst9g01265 906 ProSiteProfiles PAN/Apple domain profile. 371 454 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01265 Spst-Chr9 11999193 12002486 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01265 530 843 Receptor kinase-like Gene Family AT5G20050 42.508 1.13e-76 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Spst9g01265 Pkinase 4.2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01265 - - gmx:100305399 1304.27