Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01253 ATGGATGGGAAGCCTAACCCGGATTCCTCCTCCCCGGACTTCCTCCGCCACGTTCAAGCCGCCTTGAAACGACACCGACCACTGGGCTCAATGCAGTCCAATAGCATAAGGCCAAGGCGCACGCTGCTTCCACAACGAAAGTTATCTTCTTCCGACCCCACCAATTCTCAAGAACAAGCTTCTTCCAAGGTCTCACTTAACACCCTCGTCCCTTCCCAAAACCTAGACGCTCAGAAGAAAGTCCAATCTTCAGCTCATTCTGCTGCGCGGGATGCTAAGGCCTCCACTGAGTTGGAGAATTTATCGTCTCATATGGGTTCGCTTGGATTCGCAGAAATGGAGTGGGTTGAAGGCAACCAAATTGAAACATCATCAGCATCATCATCATCATCATCATTGCTTGGATGCAACCAGAAGGATAATGTTCAGCAGGCTGGCCTTGACGCGAGTCTGAGATGTGAGAATGGAGTGAGTTCTGTATTGCCAAAGAGAAGTGTCATTAAGCAGGATCATTTGCAACAATTAAGTAGTTTTCTGACTCAACCAGCTACGCAGTCTTCGGTCGTGCGGCCTCCATGTGCTACAACCACCTCAGTTCATTCAACTTCGGCACCTATGTTGAATTCAACAACACGATATTCTCACTCTTATCTAGACAGTGGCTCGAATGTGACTGCTGAGGTTAATGCTAATCCTCGTCCTGTGACTGAACGTGTTGTGAAATCAGTTAATGTTTTCCAAACAGAAACTAACAGTGTGTTGGTTGAGCGGGCGGCAGAAGCTGAAGTCCAAGCTACGGGTTCTTGTATTGGTGGTGCAGAATTGGCTTCTAAGGAGAGTAATCGACCTAAGGAGCAACAAGGGGGGGTGTTGAAAGAATCTGGCAGTTCTAAATATACTTCTTGGGATGATGGCAAAGGGAAAGAGGCTGTGGATATTGCCACTATACAACCGCAGGCTCCACTTCCGACAATCACAACCACATCTTCAGATGTGAAGTTGGAGTCTTCTAAGGTAGAAAAACGAGAGAAGATTGCAAGTAGTAAAGGTGCATCAGCTGCCCGAAAAAGGACTTATGACCCTGATTTGTTTTTCAAAGTTAATGGCAAGCTTTATCAGCGTCTTGGTAAGATAGGTAGTGGTGGAAGCAGTGAGGTGCACAAAGTGATTTCATCGGACTGTAGGATATATGCCCTTAAAAAGATAAAGCTTAAGGGTCGTGATTATGCTACTGCATTTGGGTTTTGTCAAGAAATTGAATATCTGAATAGGCTGAAGGGAAATGATAACATCATACAGCTCATAGATTATGAGGTGACAGACAAGGCATTGCTTGAGGAAGTTATAAAAGGCTCCTTAAGTAATAAAGACGGACGGGTCAGGGATGATGGATGTATATACATGGTACTTGAATATGGGGAAATCGATTTGGCTCACATGTTATCTCAGAAGTGGAAGGAACTGGATGGAAGCAACCAGACCATAGATGAGAACTGGCTTCGATTTTATTGGCAGCAAATTCTTCTAGCTGTCAACACTATTCACGAGGAACGTATTGTGCACTCAGACTTGAAGCCAGCTAACTTCCTTCTTGTCAAAGGTTCCCTAAAACTGATTGATTTTGGCATAGCTAAAGCTATAATGAATGACACAACCAACATCCAACGGGATTCACAGGTGGGTACACTAAGTTACATGTCTCCGGAGGCATTTATGTGTAATGAGACTGATGCGAATGGAAACGTCATAAAGTGTGGCCGGTCATCAGATATCTGGTCCCTGGGCTGCATCCTTTATCAAATGGTATACGGGAGAACACCTTTCTCTGATTACAAGACATTTTGGGCCAAATTCAAAGTGATAACAGATCCAAATTATGAAATTACATATGAACCGGTTTCAAACCCTTGGCTTTTGGATCTTATGATGAGGTGTCTAACATGGGATCGCAATCTAAGGTGGAGAATACCTCAGCTACTGGAACATCCATTTCTCGTTCCTCCTATACCATATCATCCATCAGTGCCCCAAGATCATAATAGCTGTAAATTGCTACAACATATTTCTGAAACTTGTACATATGACCCGGAAGTGTCTCAACTGTGTAGTCAGCTCCAACGCCTTCTTAGTGATCCTGTCGATAAAACAACTCACTCACTAAGTTCACGAGATCAACAACTAAAACTGCTGTCCCAAATGTCAGATCTATGTATTCAGCTGCATGAACGTCTGACAAATATTGAAAACAAGTAG 2253 0.439 MDGKPNPDSSSPDFLRHVQAALKRHRPLGSMQSNSIRPRRTLLPQRKLSSSDPTNSQEQASSKVSLNTLVPSQNLDAQKKVQSSAHSAARDAKASTELENLSSHMGSLGFAEMEWVEGNQIETSSASSSSSSLLGCNQKDNVQQAGLDASLRCENGVSSVLPKRSVIKQDHLQQLSSFLTQPATQSSVVRPPCATTTSVHSTSAPMLNSTTRYSHSYLDSGSNVTAEVNANPRPVTERVVKSVNVFQTETNSVLVERAAEAEVQATGSCIGGAELASKESNRPKEQQGGVLKESGSSKYTSWDDGKGKEAVDIATIQPQAPLPTITTTSSDVKLESSKVEKREKIASSKGASAARKRTYDPDLFFKVNGKLYQRLGKIGSGGSSEVHKVISSDCRIYALKKIKLKGRDYATAFGFCQEIEYLNRLKGNDNIIQLIDYEVTDKALLEEVIKGSLSNKDGRVRDDGCIYMVLEYGEIDLAHMLSQKWKELDGSNQTIDENWLRFYWQQILLAVNTIHEERIVHSDLKPANFLLVKGSLKLIDFGIAKAIMNDTTNIQRDSQVGTLSYMSPEAFMCNETDANGNVIKCGRSSDIWSLGCILYQMVYGRTPFSDYKTFWAKFKVITDPNYEITYEPVSNPWLLDLMMRCLTWDRNLRWRIPQLLEHPFLVPPIPYHPSVPQDHNSCKLLQHISETCTYDPEVSQLCSQLQRLLSDPVDKTTHSLSSRDQQLKLLSQMSDLCIQLHERLTNIENK 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01253 750 FunFam serine/threonine-protein kinase mph1 isoform X1 486 668 - -
Spst9g01253 750 ProSiteProfiles Protein kinase domain profile. 372 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g01253 750 ProSitePatterns Serine/Threonine protein kinases active-site signature. 519 531 IPR008271 GO:0004672|GO:0006468
Spst9g01253 750 MobiDBLite consensus disorder prediction 22 98 - -
Spst9g01253 750 Gene3D Transferase(Phosphotransferase) domain 1 486 667 - -
Spst9g01253 750 Pfam Protein kinase domain 372 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g01253 750 SUPERFAMILY Protein kinase-like (PK-like) 366 674 IPR011009 -
Spst9g01253 750 MobiDBLite consensus disorder prediction 274 304 - -
Spst9g01253 750 CDD PKc_Mps1 370 665 IPR027084 -
Spst9g01253 750 FunFam serine/threonine-protein kinase mph1 isoform X2 365 452 - -
Spst9g01253 750 MobiDBLite consensus disorder prediction 28 98 - -
Spst9g01253 750 ProSitePatterns Protein kinases ATP-binding region signature. 378 400 IPR017441 GO:0005524
Spst9g01253 750 PANTHER MIXED LINEAGE PROTEIN KINASE 54 698 - -
Spst9g01253 750 SMART serkin_6 372 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g01253 750 Gene3D Phosphorylase Kinase; domain 1 365 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01253 Spst-Chr9 11921963 11926101 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01253 378 666 MAP Kinase Kinase Kinase AT4G08470 29.000 1.19e-23 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TTK Spst9g01253 Pkinase 1.3e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01253 K08866 - gmx:100788990 1216.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01253 9 11921963 11926101 Spst9g01253 9 11921963 11926101 ECH