Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01250 ATGGAGAATTTGCAGAGTGCCCTAAAAGATCGTAACTTATCAGTTCCCATCGTCCCAGGAAAGGGTCGTTCTCTCTTCGCTACAAGGGATTTCTATTCAGGGGATGTGATTATAGGCCAAGAGCCTTACGTTTGTGTTCCAAACAACTCCTCAGTTTCCACCCCCAAAAGGTGTGATGGATGTTTCACTACATCTAATGCCCTTAGAAGGTGCTCACGTTGCCATGTTGCATACTATTGCGGAACCGCATGTCAGAGGTCAGAGTGGGAGCTGCATCGGCTTGAGTGTGAGGTACTCTCAAGGCTTGACAAGGAAAAGAGAAATTCTGTCACACCATCCATACGGCTGATGGTGAGACTTTATCTTCGGAGGAAGTTGCAAAATGATAAGGTCATCCCAAGCACTGCTACGGACAACTACAACTTGGTGGAGGCATTAGTTGCTCACATGTCTGATATCACAGAGGAGCAGCTGGTGCTCTATGCACAGATGGCCAATCTTGTATATTCCATATTACAATGGCCGGAAATCAATATAAAAGAGATTACAGAAAATTTTTCTAAGTTTGCATGTAATGCACATACTATTTGTGACAGTGAGTTGAGACCTGTGGGGACAGGGTTGTATCCTGTTATTTCCATTATCAATCATAGTTGTTTGCCCAATTCTGTGTTGGTTTTTGAGGGAAGGTCAGCATCGGTACGTGCTGTGCAGCATATACCTAAAGGTACTGAGGTATCAAACTCTTCCAACACCGCTGCCACCGTTGGGGTTTCTAGAATTCCTCCCTTTGTTTCCTTCAACTCTGTTGCTTGGTATGATAGTACATACCCTTCTCCCTTATTGTGA 849 0.4441 MENLQSALKDRNLSVPIVPGKGRSLFATRDFYSGDVIIGQEPYVCVPNNSSVSTPKRCDGCFTTSNALRRCSRCHVAYYCGTACQRSEWELHRLECEVLSRLDKEKRNSVTPSIRLMVRLYLRRKLQNDKVIPSTATDNYNLVEALVAHMSDITEEQLVLYAQMANLVYSILQWPEINIKEITENFSKFACNAHTICDSELRPVGTGLYPVISIINHSCLPNSVLVFEGRSASVRAVQHIPKGTEVSNSSNTAATVGVSRIPPFVSFNSVAWYDSTYPSPLL 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01250 282 Gene3D SET domain 24 249 IPR046341 -
Spst9g01250 282 SMART set_7 11 257 IPR001214 GO:0005515
Spst9g01250 282 Pfam SET domain 22 249 IPR001214 GO:0005515
Spst9g01250 282 SUPERFAMILY SET domain 10 249 IPR046341 -
Spst9g01250 282 ProSitePatterns Zinc finger MYND-type signature. 58 96 IPR002893 -
Spst9g01250 282 Pfam MYND finger 58 96 IPR002893 -
Spst9g01250 282 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SMYD 15 249 - -
Spst9g01250 282 ProSiteProfiles Zinc finger MYND-type profile. 58 96 IPR002893 -
Spst9g01250 282 ProSiteProfiles SET domain profile. 11 251 IPR001214 GO:0005515
Spst9g01250 282 Gene3D - 109 193 - -
Spst9g01250 282 Gene3D - 57 105 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Spst9g01250 SET 2.2e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01250 K11426 - gmx:100789518 419.853