Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01240 ATGCATCACCTATCTCGGATTTTTGAGCATCGCAACCGTACCAAGGCCATGGATCGCAAGAACCCGCGGAGGAAGCCCAAGCTCGAGCGCCGCAACGCCCTCAAGTACTCCGAATACGACGCGGGATCGTCTACCTCCGACGACACGCTCTACACGCGCTCCATGGAGTTCTACGACCGCACCAGCTTCCGAATCGAGGGCGTCGAGGGCGAGTTCGATCGAATTTGCAGGAGTTTGGGCCTCTCCGGCCCAGAAGATTTCGCTATTCCCGCTGCGGCCTGGGAAGCCATGAAGTTTCGTTCCTCTTCGGATATTCTCCCGAGACTGAAGCTCGACAACCTCGATATTCCCGAGGAAGAGGAAGAAACCAGCGAAGAAGAAGAAGAACCGAAGGTAAACGAGGAGATAATAGTAAAACCACCTGAGGAATGTGAATTGACTGAAAAGTTCCAAGATAGGGTTAAGGTGAGGGAGGTAGATGAATCGAGCACCGGTATTAAGGGGGTTCGGCCGCCGATGCTGAAGCCGCCGCCGGGGGCGAGGGTTCAGATGGTGGATGATTTTGCGTGTTCCACGTGGGACCTTTTGAGGGATTTGGCTCCGATAGGGGAAGGGGTACAGATGAAGCATTCCGAGCATGAGATGGAATTAGAGAACGTTGCTCCGCAAGGAGAAGTAGAGAGGGAAGTAGCAGAGAAGGAAGAAGGGGAAGTGGGTAGAGCGAATCCGAAGAGGGACGAGGAAGAGAATGTGGATAGTGCAGCGAGGATTGCGGAGATCGTGGCTGGGTTTTCGGAATCGTGTTCGTTTTCCACGTCGAACGAAGATGATTCTTCCAGTAGTACCACGGATCATACGTCCAATAATATTTCTCCGCAAGGGAGAATCAAGCGGATTATTACCGCCGGAAGCTGGCAGAAGGGTGAGTTTCTTGGGGGTGGCTCGTTTGGCTCCGTTTTTGAAGGAATTTCTGATGACGGGTTCTTTTTCGCTGTAAAAGAAGTTTCACTGCTTGATCAGGGGACTGTGGGAAAGCAAAGTGTATATCAACTGGAGCAGGAAATAGCACTTTTGAGTCAGTTTGAGCATGACAATATTGTTCAATACTATGGCACGGAAATGGATGAATCAAAGCTGTATATCTTTCTTGAGTTTGTAACCAAAGGTTCCCTAAGAAGCCTCTATCAGAAGTATACACTACGAGATTCCCAAGTATCTGCCTATACAAGACAGATTTTGCTTGGTTTGAAATATCTTCATGATAGAAATGTGGTTCACAGGGATATCAAATGTGCAAATATATTGGTGGATGCAAGTGGATCTGTCAAGCTTGCAGATTTTGGATTGGCAAAGGCAACCAAATTGAATGACGTTAAATCAATGAAGGGTACAGCATTCTGGATGGCCCCCGAGGTTGTGAAAGGAAAGAACAAGGGTTATGGGCTTCCAGCTGATATGTGGAGTCTGGGATGCACTGTACTGGAGATGTTAACAGGCCAACTTCCGTACTGTGATTTGGAATGTATGCAGGCATTATTTAGAATTGGAAAAGGTATTCGACCTTCTATTCCTGACTCTCTTTCCAGAGATGCAAGCGATTTTATCCTGCAGTGCCTTCAAGTTAATCCAAATGATCGTCCCACTGCTGCTCAACTTTTAAACCATTCATTTGTCCAAAGGCCACTTTCCCAGTCCTCTGGTTCTTCATTTCCTCATGTTCATGGCCGGAAGGATTAA 1737 0.4801 MHHLSRIFEHRNRTKAMDRKNPRRKPKLERRNALKYSEYDAGSSTSDDTLYTRSMEFYDRTSFRIEGVEGEFDRICRSLGLSGPEDFAIPAAAWEAMKFRSSSDILPRLKLDNLDIPEEEEETSEEEEEPKVNEEIIVKPPEECELTEKFQDRVKVREVDESSTGIKGVRPPMLKPPPGARVQMVDDFACSTWDLLRDLAPIGEGVQMKHSEHEMELENVAPQGEVEREVAEKEEGEVGRANPKRDEEENVDSAARIAEIVAGFSESCSFSTSNEDDSSSSTTDHTSNNISPQGRIKRIITAGSWQKGEFLGGGSFGSVFEGISDDGFFFAVKEVSLLDQGTVGKQSVYQLEQEIALLSQFEHDNIVQYYGTEMDESKLYIFLEFVTKGSLRSLYQKYTLRDSQVSAYTRQILLGLKYLHDRNVVHRDIKCANILVDASGSVKLADFGLAKATKLNDVKSMKGTAFWMAPEVVKGKNKGYGLPADMWSLGCTVLEMLTGQLPYCDLECMQALFRIGKGIRPSIPDSLSRDASDFILQCLQVNPNDRPTAAQLLNHSFVQRPLSQSSGSSFPHVHGRKD 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01240 578 MobiDBLite consensus disorder prediction 114 133 - -
Spst9g01240 578 Gene3D Transferase(Phosphotransferase) domain 1 303 574 - -
Spst9g01240 578 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 121 566 - -
Spst9g01240 578 MobiDBLite consensus disorder prediction 116 131 - -
Spst9g01240 578 ProSitePatterns Serine/Threonine protein kinases active-site signature. 424 436 IPR008271 GO:0004672|GO:0006468
Spst9g01240 578 MobiDBLite consensus disorder prediction 11 46 - -
Spst9g01240 578 Pfam Protein kinase domain 306 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g01240 578 FunFam Mitogen-activated protein kinase 1, putative, expressed 303 570 - -
Spst9g01240 578 ProSitePatterns Protein kinases ATP-binding region signature. 311 333 IPR017441 GO:0005524
Spst9g01240 578 MobiDBLite consensus disorder prediction 268 293 - -
Spst9g01240 578 SUPERFAMILY Protein kinase-like (PK-like) 302 561 IPR011009 -
Spst9g01240 578 ProSiteProfiles Protein kinase domain profile. 305 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g01240 578 SMART serkin_6 305 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g01240 578 MobiDBLite consensus disorder prediction 212 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01240 Spst-Chr9 11779867 11785565 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01240 4 562 MAP Kinase Kinase Kinase AT4G08500 47.896 1.47e-162 475
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Spst9g01240 Pkinase 6.5e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01240 K13414 - gmx:100819999 925.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01240 9 11779867 11785565 Spst9g01240 9 11779867 11785565 ECH
Spst8g01292 8 12054148 12061954 Spst9g01240 9 11779867 11785565 PCT