Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01216 ATGTCGTCGTCGTCGTCTTCCTCTTCCAATTCGCCGTGCGCGGCCTGCAAGATTCAGCGCCGGAAGTGCACGCAGGAGTGCGTGTTCGCGCCGTATTTTCCGCCGGACAACCCGCAGCGCTTCGCCTACGTGCACAAGGTGTTCGGGGCGAGCAACGTGGCCAAGCTTCTCAACGAGCTCAACGCGGCGCAGCGCGAGGACGCGGTTAAGTCACTCGCCTACGAGGCCGAGGCGCGTCTGCGGGACCCTGTCTATGGCTGTGTGGGTCTCATCTCCATCCTCCAGCACCGCCTCAAGCAGTTGCAGACCGAACTCCACCACGCCAAGAAGGAACTCGCCTCTTACATGGGAACCCATTCCATGCTCCCTCCTCCTCCGCCTCCTCCGCCTCAACCCCGCACCTTCTCTCTCTTTCCCTTCAAAACGGCGCCTCCTCCTCAGCAGGATCTTTTCTCCTTCAACGATGACGGTGCTTCCGCTTCTCACGCTTCCCACGCCGCCTTCAACAACCTCGCTGTTCTCTCCCCTTCCCTCGCCGCCGATCACGCGTTCCCTCACGCGCCCACCCACCCTCTCGCTCTTCCGCATCACCAACACCTAATGCTCTCCCGTATGCAACCCAAGCCCCAAACCGACCCTGTTGAGGTGGTTTTGCTGCACCTAATCAAGGAAGGGATGTTATCTTCTCTTTCACAGACAGACTTAGTTCTTCTCGGTGGGAGACAAAAGGGTGTAAAGAAGGAAGGAGAAACAAAGTTGCAGAAAGGGGAAGGAAAGTGGGGGGAGAGAGAGAAGGGTAGGGATATATGA 810 0.584 MSSSSSSSSNSPCAACKIQRRKCTQECVFAPYFPPDNPQRFAYVHKVFGASNVAKLLNELNAAQREDAVKSLAYEAEARLRDPVYGCVGLISILQHRLKQLQTELHHAKKELASYMGTHSMLPPPPPPPPQPRTFSLFPFKTAPPPQQDLFSFNDDGASASHASHAAFNNLAVLSPSLAADHAFPHAPTHPLALPHHQHLMLSRMQPKPQTDPVEVVLLHLIKEGMLSSLSQTDLVLLGGRQKGVKKEGETKLQKGEGKWGEREKGRDI 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01216 269 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 9 152 - -
Spst9g01216 269 ProSiteProfiles LOB domain profile. 11 112 IPR004883 -
Spst9g01216 269 Coils Coil 91 118 - -
Spst9g01216 269 MobiDBLite consensus disorder prediction 241 269 - -
Spst9g01216 269 Pfam Lateral organ boundaries (LOB) domain 12 109 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01216 Spst-Chr9 11489744 11491186 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01216 7 133 AS2 family AT5G66870 75.573 1.14e-64 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Spst9g01216 LOB 4e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01216 - - gmx:100819170 311.612