Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01210 ATGAGTTCAGTTCCCAGTATGAGAGTAAGCGAGCAGGAGCACTTTCATCTTGAGGATACTAGCCAAATAGAGAGGTCCCTTTGGGTGCTGAATCCTCCCAATCCACCACCTCTATGGAACAATCTATTTAGTCCACTGAAGAAAACCGTGTCTTTTTTTTCATCCAAGAAGCAAACTTGCCTTGGACGTGTTGTTTCATTCTTAGAGAGTTTATTTCCTATCCTTACCTGGTTCAAAAATTACAAAGCCTCCAAGTTTAAAAATGATTTGCTAGCCGGTTTAACTCTTGCCAGCCTCAGCATACCTCAGAGTATAGGATATGCTAATTTGGCACAACTTGATCCTCAGTATGGCCTGTACACCAGTGTTGTTCCTCCACTTATCTATGCTGTGATGGGGAGTTCAAGAGAAATAGCAATTGGGCCTGTAGCTGTAGTATCATTACTTCTATCTTCCCTAGTCCCCAAAGTGGTAGATCCTGCTGTTGATCCTGATGCCTACAGAAGTGTTGTCTTTACGGTGACCTTATTTGCTGGAATCTTTCAAGCTGCATTCGGTGTTTTCAGGTTGGGGTTTCTCGTGGATTTTCTTTCACATGCTGCACTTGTTGGATTCATGGCAGGCGCAGCCATTATTATTGGTCTTCAGCAGCTCAAGGGGTTGCTGGGGGTTACTCACTTTACCAATAAAACCGATGTAATATCCGTGTTGGAGTCTGTATACAAGTCACTCCATCAACAAATTACATCAGGAGAAAAATGGTGCCCTCTGAATTTTGTCATCGGATGTTCATTCCTGATTTTCCTTTTAGTTGCCCGATATGTTGGCAGAAGAAACAAAAAACTTTTCTGGTTGCCAGCTATTGCTCCTCTTCTATCAGTTTTACTATCAACTTTAATTGTGTATTTGTCAAAAGCTGATAAGAAAGGGGTTAATATAATAAAGCATGTCAAAGGAGGCTTGAATCCAAGTTCAGTTCACAAGTTACAATTCCAGGGTCAACATGTTGGACAAGCAGCTAAAATTGGATTGATTTCTGCCGTTATTGCTCTCACTGAAGCAATAGCAGTTGGTCGATCTTTTGCATCCATTAAGGGATACCATCTTGATGGCAACAAAGAAATGTTGGCAATGGGATGTATGAACATTGCGGGATCTCTCTCTTCGTGCTATGTAGCAACTGGTTCTTTCTCAAGGACTGCAGTAAATTTCAGTGCAGGATGTCAAACATCAATATCAAATATTGTGATGGCAGTTACTGTGCTTCTGTGTCTAGAATTGTTTACAAGGCTCCTATACTACACTCCTATGGCCATACTTGCTTCTATCATCCTCTCTGCACTTCCTGGATTAATTGACATAAATGAAGCTTGCTATATTTGGAAGGTTGACAAATATGACTTTCTTGCCTGCATTGGTGCCTTCTTCGGTGTCTTGTTTGTATCAGTCGAAATTGGTCTTCTTGTTGCAGTGTCAATCTCATTTGCAAAGATACTAATACAATCAATTCGACCAGGGATAGAAATTTTAGGCAGAGTTCCAAGAACAGAAGCATTTTGCGATGTTAGTCAATATCCTATGGCCACAAGCACTCCAGGCATCTTGGTGATTCGCATAAGCTCTGGCTCACTCTGCTTTGCAAATGCTAATTTTATTAGAGAAAGAATACTGAAGTGGGTCACGGAAGAAGAAAACGAACTTGGCAAGGGAAGGGTTCATGCAGTAATCTTGGACATGAGCAACCTCATGAATGTTGATACTTCTGGGATTCTAGTACTGGAGGAACTGCACAAGAGGTTGCTTTCGCGTGGCGTGCAATTGGCTATGGTGAACCCGAGGTGGCTAGTGATTTACAAGCTCAAAGTGGCACATTTTGTGGATAAAGTTGGAAAGAAATGGGTTTTCCTTACTGTTGCTGAAGCCGTAGATGCATGTCTATCTTCAAAATTCCCTGACCCATGA 1962 0.4164 MSSVPSMRVSEQEHFHLEDTSQIERSLWVLNPPNPPPLWNNLFSPLKKTVSFFSSKKQTCLGRVVSFLESLFPILTWFKNYKASKFKNDLLAGLTLASLSIPQSIGYANLAQLDPQYGLYTSVVPPLIYAVMGSSREIAIGPVAVVSLLLSSLVPKVVDPAVDPDAYRSVVFTVTLFAGIFQAAFGVFRLGFLVDFLSHAALVGFMAGAAIIIGLQQLKGLLGVTHFTNKTDVISVLESVYKSLHQQITSGEKWCPLNFVIGCSFLIFLLVARYVGRRNKKLFWLPAIAPLLSVLLSTLIVYLSKADKKGVNIIKHVKGGLNPSSVHKLQFQGQHVGQAAKIGLISAVIALTEAIAVGRSFASIKGYHLDGNKEMLAMGCMNIAGSLSSCYVATGSFSRTAVNFSAGCQTSISNIVMAVTVLLCLELFTRLLYYTPMAILASIILSALPGLIDINEACYIWKVDKYDFLACIGAFFGVLFVSVEIGLLVAVSISFAKILIQSIRPGIEILGRVPRTEAFCDVSQYPMATSTPGILVIRISSGSLCFANANFIRERILKWVTEEENELGKGRVHAVILDMSNLMNVDTSGILVLEELHKRLLSRGVQLAMVNPRWLVIYKLKVAHFVDKVGKKWVFLTVAEAVDACLSSKFPDP 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01210 653 FunFam Sulfate transporter 31 504 648 - -
Spst9g01210 653 Pfam STAS domain 525 641 IPR002645 -
Spst9g01210 653 NCBIfam sulfate permease 73 641 IPR001902 GO:0016020|GO:0055085
Spst9g01210 653 ProSitePatterns SLC26A transporters signature. 115 136 IPR018045 GO:0008271|GO:0008272
Spst9g01210 653 ProSiteProfiles STAS domain profile. 541 645 IPR002645 -
Spst9g01210 653 Gene3D STAS domain 504 648 IPR036513 -
Spst9g01210 653 SUPERFAMILY SpoIIaa-like 529 645 IPR036513 -
Spst9g01210 653 CDD STAS_SulP_like_sulfate_transporter 525 638 - -
Spst9g01210 653 PANTHER SULFATE TRANSPORTER 54 646 IPR001902 GO:0016020|GO:0055085
Spst9g01210 653 Pfam Sulfate permease family 86 472 IPR011547 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01210 Spst-Chr9 11418102 11422051 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01210 21 649 Inorganic Solute Cotransporters AT5G10180 63.693 0.0 831
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01210 K17469 - gmx:100805269 1162.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01210 9 11418102 11422051 Spst9g01210 9 11418102 11422051 ECH
Spst8g01262 8 11727339 11730801 Spst9g01210 9 11418102 11422051 PCT