Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01209 ATGGGTCCTCCTGCTGATAAAAATCTTGAAACTAAAGAGGTCGATCTGAGAAGTATGTCATCTTCTTCACATGGTCAGGCACCACAAGTCTACAAAGTGGCGGTTCCTCCAAGACAGAACCTGTTCAAGGAATTCCAAGCCACCATAAAAGAAACATTCTTTGCTGATGATCCTCTAAGACCCTTCAAAGATCAAACTAAATCAAGGAAGCTTGTCCTTGGTATTGAGGCCATATTCCCCATACTTAAGTGGGGAAGAAGTTACAATCTTAAAAAATTTAGAGGGGATTTAATATCTGGTCTCACTATTGCGAGTCTTTGCATCCCTCAGGATATTGCATACGCCAAGCTTGCAAATTTGGATCCACAGTATGGACTGTACTCAAGTTTTGTTCCACCACTGATTTATGCTGTCATGGGTAGCTCTCGTGATATTGCTATAGGACCAGTAGCAGTGGTTTCTCTCTTGTTGGGGACCTTACTTAGTCATGAAATTGATCCTAAGGAAAATGCGGCAGAATATCGGCGACTTGCTTTTACGGCCACTTTTTTTGCTGGAATTACTCAAGCAACGCTTGGTGTTCTTAGGTTAGGATTTTTGATTGACTTCCTATCCCATGCTGCTATCGTCGGTTTTATGGGGGGTGCTGCCATCACAATTTCCCTTCAACAGCTGAAGGGTTTCCTTGGCATTAAAACTCAACATTTCACAAAGAAAACTGATATTATCTCCGTGCTGCATTCAGTATTCAATACAGCACATCATGGATGGAACTGGCAAACTATAGTTATTGGAGCTAGCTTTTTGGGTTTTCTTCTGGTCGCCAAATACATAGGAAAGAAAAACAATAGATTATTCTGGGTGCCAGCAATTGCTCCGTTGATATCCGTTATTTTGTCCACTTTTTTTGTATTCATAACCCGTGCAGATAAGCAAGGAGTAGAAATTGTGAGAAAAATAGAAAAAGGAATCAATCCTTCATCTGTTAAAGATCTTTATTTGACCGGAGAAAACCTTGCAAAAGGTTTTAAAATTGGCATCGTGGCAGGCATGATAGCATTGACTGAAGCCACAGCAATTGGAAGAACATTTGCATCTATCAAGGACTATCAACTGGATGGAAACAAAGAAATGGTTGCACTAGGAGCAATGAATGTTGTTGGTTCGATGACTTCCTGTTATGTGGCAACCGGTTCGTTCTCTCGGTCAGCTGTAAATTTCATGGCTGGCTGCCAAACTGCAGTCTCTAACATTGTGATGTCAGTAGTTGTGTTCTTAACCCTGGAATTCATGACTCGCCTTTTTAAGTACACTCCAAATGCGATTCTTTCTGCCATCATCATTTCTGCTGTTATCAACCTTATAGACCTTGAGGCAGCAATTTTGATTTGGAAGATAGATAAATTTGACTTTGTTGCTTGCATGGGTGCATTCTTTGGTGTTGTTTTTGTCTCGGTTGAGATAGGACTTCTAATTGCTGTCTCTATATCCTTTGCAAAGATCCTACTACAAGTGACAAGGCCCCGAACTGCGATTCTAGGGAAGATTCCTAGAACAACTGTCTATAGAAACATCCAACAATATCCAGAAGCTAGTAAGGTTCCAGGTGTACTGATTGTCAGAGTTGATTCTGCAATATATTTTTCCAACTCTAATTATGTTAAAGAAAGGACATTAAGATGGCTGATGGATGAAGAAGAAAAAGTGAAAGGAGAGTACCGCACAAAAATCCAGTTTTTGATTGTTGAAATGTCACCCGTTACTGACATCGACACAAGTGGCATCCAAGCCTTTGAAGAGTTACACAGAAGTCTTGAAAAGAGAGGAGTTGAGCTTGTTCTGGCAAATCCTGGTACAGCAGTGATAGACAAGCTTTACGCATCCAATTTTGCAAACACAATTGGCGAGGACAAGATCTTCCTCACTGTTGCAGAGGCTGTTGCATATTGTTCTCCAAAGGTAGTTGTGGACCCTTGA 1977 0.4082 MGPPADKNLETKEVDLRSMSSSSHGQAPQVYKVAVPPRQNLFKEFQATIKETFFADDPLRPFKDQTKSRKLVLGIEAIFPILKWGRSYNLKKFRGDLISGLTIASLCIPQDIAYAKLANLDPQYGLYSSFVPPLIYAVMGSSRDIAIGPVAVVSLLLGTLLSHEIDPKENAAEYRRLAFTATFFAGITQATLGVLRLGFLIDFLSHAAIVGFMGGAAITISLQQLKGFLGIKTQHFTKKTDIISVLHSVFNTAHHGWNWQTIVIGASFLGFLLVAKYIGKKNNRLFWVPAIAPLISVILSTFFVFITRADKQGVEIVRKIEKGINPSSVKDLYLTGENLAKGFKIGIVAGMIALTEATAIGRTFASIKDYQLDGNKEMVALGAMNVVGSMTSCYVATGSFSRSAVNFMAGCQTAVSNIVMSVVVFLTLEFMTRLFKYTPNAILSAIIISAVINLIDLEAAILIWKIDKFDFVACMGAFFGVVFVSVEIGLLIAVSISFAKILLQVTRPRTAILGKIPRTTVYRNIQQYPEASKVPGVLIVRVDSAIYFSNSNYVKERTLRWLMDEEEKVKGEYRTKIQFLIVEMSPVTDIDTSGIQAFEELHRSLEKRGVELVLANPGTAVIDKLYASNFANTIGEDKIFLTVAEAVAYCSPKVVVDP 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01209 658 FunFam Sulfate transporter 31 507 653 - -
Spst9g01209 658 PANTHER SULFATE TRANSPORTER 39 650 IPR001902 GO:0016020|GO:0055085
Spst9g01209 658 Pfam Sulfate permease family 93 475 IPR011547 GO:0016020
Spst9g01209 658 ProSiteProfiles STAS domain profile. 527 650 IPR002645 -
Spst9g01209 658 MobiDBLite consensus disorder prediction 1 29 - -
Spst9g01209 658 SUPERFAMILY SpoIIaa-like 529 651 IPR036513 -
Spst9g01209 658 ProSitePatterns SLC26A transporters signature. 122 143 IPR018045 GO:0008271|GO:0008272
Spst9g01209 658 Gene3D STAS domain 507 654 IPR036513 -
Spst9g01209 658 Pfam STAS domain 528 646 IPR002645 -
Spst9g01209 658 NCBIfam sulfate permease 80 646 IPR001902 GO:0016020|GO:0055085
Spst9g01209 658 CDD STAS_SulP_like_sulfate_transporter 528 643 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01209 Spst-Chr9 11349525 11353275 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01209 4 654 Inorganic Solute Cotransporters AT1G22150 74.347 0.0 974
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01209 K17470 - gmx:100804208 1165.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01209 9 11349525 11353275 Spst9g01209 9 11349525 11353275 ECH
Spst8g01260 8 11700209 11704410 Spst9g01209 9 11349525 11353275 PCT