Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01173 ATGTGCCTTTGTTATGCAATCAAATACTTATCCTCCCTTCTACATATGTCGCCTGTACTAGCAGGACTATTCAATTTCTCTGTGTTGGTTGCTTTACAGCTTGTAGCAGCACGTTCTTCATCCAGCACTGGTAAGGGGAAAAATCATGAAGGCTCAATAAAGTATGGTTTCAGCCTAGTAAAAGGGAAAGCTAATCACCCAATGGAGGATTATCATGTTGCCAAGTTTGCACAGATAAAAGATAATGAATTGGGTTTATTTGCTATCTATGATGGCCACTTGGGTGACCGTGTCCCGGCCTACTTGCAGAAACATTTGTTTACCAACATTCTGCGGGAGGAGGAATTTTGGGAAGACCCCACTCTTTCTATCTCAAAAGCATACGAGAGCACAGATCAGGAAATTCTATCACACAGTTCTGATCTTGGGCGTGGTGGATCAACAGCCGTAACTGCTATATTGATCAATGGGCGAAGATTATGGATAGCTAATGTTGGAGACTCACGAGCTGTTCTTTCAAGAAAAGGTCACGCTTTACAAATGACTACAGACCACGAGCCAAACATGGAAAGAGGTAGTATTGAGAATAGAGGTGGCTTTGTCTCTAATTTGCCAGGTGATGTGCCTAGAGTAAATGGACAACTTGCTGTTTCTCGTGCATTTGGAGACAAGAGTCTCAAGTCACATTTGCGCTCAGACCCTGATGTACAGAATGCTGACATAGATGTTGATACTGAGATTCTAATCCTTGCAAGTGATGGACTTTGGAAGGTAATGACTAATCAAGACGCAGTGGATATTGCTAGAAGATCGAAAGACCCACAGAAAGCAGCTAAGCAACTTACGGCTGAAGCATTAAAAAGAGATAGTAAAGATGATATATCCTGTGTTGTGGTTAAATTCAGATGA 909 0.4191 MCLCYAIKYLSSLLHMSPVLAGLFNFSVLVALQLVAARSSSSTGKGKNHEGSIKYGFSLVKGKANHPMEDYHVAKFAQIKDNELGLFAIYDGHLGDRVPAYLQKHLFTNILREEEFWEDPTLSISKAYESTDQEILSHSSDLGRGGSTAVTAILINGRRLWIANVGDSRAVLSRKGHALQMTTDHEPNMERGSIENRGGFVSNLPGDVPRVNGQLAVSRAFGDKSLKSHLRSDPDVQNADIDVDTEILILASDGLWKVMTNQDAVDIARRSKDPQKAAKQLTAEALKRDSKDDISCVVVKFR 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01173 302 FunFam Probable protein phosphatase 2C 39 45 302 - -
Spst9g01173 302 SUPERFAMILY PP2C-like 52 301 IPR036457 -
Spst9g01173 302 PANTHER PROTEIN PHOSPHATASE 49 301 IPR015655 GO:0004722|GO:0006470
Spst9g01173 302 CDD PP2Cc 53 301 IPR001932 -
Spst9g01173 302 Gene3D - 49 302 IPR036457 -
Spst9g01173 302 ProSiteProfiles PPM-type phosphatase domain profile. 54 301 IPR001932 -
Spst9g01173 302 Pfam Protein phosphatase 2C 63 294 IPR001932 -
Spst9g01173 302 SMART PP2C_SIG_2 65 301 IPR001932 -
Spst9g01173 302 SMART PP2C_4 50 299 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01173 Spst-Chr9 10751080 10752895 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01173 31 302 PP2C-type Phosphatase Gene Family AT1G22280 74.460 8.20e-149 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01173 K17506 - gmx:100797292 519.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01173 9 10751080 10752895 Spst9g01173 9 10751080 10752895 ECH