Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01170 ATGTTGATGGAGTACACACTAAAGATTTTGAGAGATTCCGAAAATGTTGCAGGGTTTAGTGTTGGAGTTTTCTTAGTTATTTGTCTCTTGGTTTTGTTGGCACTTATTTTGATTCAAAGGAAGTGTAGGAGAGAAAGGAAGAGGCAGGAAATGGAAGATTGGGAGTTGGAGTATTGGTCACACAGAATGGTGTATGAAGAAATTGAGGCAACAACAAAGGGGTTTTCTGAGGATTATGTGATTGGGGTTGGTGGGAATGGGAAAGTCTACAGGGGTGTTTTAAGAGGAGGGGTGGCGATTGTTTTGAAGTGCATTTCTCATAAAAATGATGGTGTGCAACAATTTCTAGCTGAAGTTTCAAGCCTTGGGAGACTGAAACAAAGGAATTTGGTGGGGTTGAGAGGTTGGTGCAAGAAAGATGTTAGGAGTTTCTTGTTAGTCTATGACTACATGGAAAACTGTAGCTTGGACAAGAGGGTGTTTGATTGTGATGAGAGCAAGATGTTAAGTTATTTTAGTAGAATATCTCCACTTCATTTAAGGAAATTTGGATATGACTTGATAACTCTATTATAA 576 0.3872 MLMEYTLKILRDSENVAGFSVGVFLVICLLVLLALILIQRKCRRERKRQEMEDWELEYWSHRMVYEEIEATTKGFSEDYVIGVGGNGKVYRGVLRGGVAIVLKCISHKNDGVQQFLAEVSSLGRLKQRNLVGLRGWCKKDVRSFLLVYDYMENCSLDKRVFDCDESKMLSYFSRISPLHLRKFGYDLITLL 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01170 191 ProSitePatterns Protein kinases ATP-binding region signature. 81 103 IPR017441 GO:0005524
Spst9g01170 191 SUPERFAMILY Protein kinase-like (PK-like) 47 185 IPR011009 -
Spst9g01170 191 ProSiteProfiles Protein kinase domain profile. 75 191 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g01170 191 FunFam Putative L-type lectin-domain containing receptor kinase VII.2 37 150 - -
Spst9g01170 191 Gene3D Phosphorylase Kinase; domain 1 37 150 - -
Spst9g01170 191 Pfam Protein kinase domain 77 161 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g01170 191 PANTHER - 19 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01170 Spst-Chr9 10710631 10711206 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01170 11 165 Receptor kinase-like Gene Family AT4G04960 56.173 1.43e-55 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Spst9g01170 Pkinase 2.3e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01170 - - vum:124842909 243.432