Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01150 ATGAATAACGAGAAAGATCGCCGGATAGAAGCTCTCGGAGACTTTGGAGTCCTTCCTGACGAAATCCTCTGCGCTATTTTGGAACGTTTCACTCCCCGAGAGGTTGCTCGCGTTGCTTGTGTTAGCAGTGTGATGTACATACTGTGCAACGAAGAACCACTGTGGATGAGTCTATGCCTAAAAGGAGCATCTGGTTTGCTTCAATACAAAGGCTCTTGGAAGAAAACTGCTCTGCATAATTTGAATCTACCAGACAAATACAATGACTACCGTCGAGGACCTTTATATTTTGATGGTTTCAACTCTTTATTTTTGTACAGGAGATTATATCGCTGTCATACCACATTGGATGCTTTTTATGTCGATACTGGAAATGTCGAAAGAATAAAAGATATCTCATTGAAGGACTTCTATAATGAGTATGATGCAAAGAAACCGGTTATGCTCAGTGGATTGGCTGATACATGGCCGGCCAGGCATAAATGGACAACTGATCAGCTGTTGCTAAACTATGGAGATGTAGCGTTCAAAATTTCTCAAAGGGGTGCCCGGAAGATCTCCATGAAGTTCAAGGATTATGTCTCTTACATGAAAATTCAGCATGATGAAGATCCCTTATATATTTTTGATGAAAAGTTTGGTGAAGCTGCACCTACCTTATTGAAGGATTATTGTGTGCCTCATCTATTTGAAGAAGACTTCTTTGATATCTTAGATACAGATAAACGACCATCCTATAGGTGGCTCATAATTGGACCAGAGAGATCTGGTGCCTCTTGGCATGTTGATCCAGCTCTTACCAGTGCATGGAATACTCTTCTTTGTGGCCGGAAAAGGTGGGCATTATATCCTCCAGGAAAAGTGCCTTTGGGTGTGACAGTGCATGTTAATGAAGAAGACGGGGATGTCAATGTTGAGACCCCATCATCACTCCAGTGGTGGCTGGACTTTTATCCTCTTCTTGCTGATGAAGACAAGCCAATTGAATGTACACAACTACCTGGAGAAACAATTTATGTTCCAAGTGGATGGTGGCACTGTGTGCTAAATTTGGAAACAACTATTGCTGTCACGCAGAATTTTGTGAATTCCAACAACTTTGAGTTTGTATGTTTGGATATGGCACCTGGTTATCATCATAAAGGGGTTTGCCGTGTTGGGTTGCTTGCTCTTGATGAAGATAGTTATGGCAATGTCAAACAGAACATGCCATGTAATGAAGAGAACTCAAGTTCCTCTGATTTGTCAAGGAAAGAGAAAAGAGCCAAAACTCAGAAAGATGCAGATGATCTATATAATGGAAGAGCCATAAATGGTGTATCTAGAAGCTACAATTTATGGAAAGATGGATTTTCCTATGATATAAACTTCTTATCCATGTTTTTGGATAAAGACAGGGACCACTACAGTTCCCACTGGAGCTCAGGGAACAGCATTGGTCAGCGAGAACTAAGAGAATGGTTATCCAAGCTCTGGATTCAAAAACCAAAAATACGAGAGCTAATATGGAGGGGAGCATGTATTGCACTAAATGCCAACAAGTGGTTAGAATACGTATCAAAAATTTGCGCCTTCCATAATTTGCCCCCTCCCACTGATGATGAAAGGCTTCCAGTTGGTATGGGTAGCAATCCTGTTTACTTAGCAGGAAAGTCCGTTGTTAAGATTTTTGTTGAAGGAGGACTTGAAGCTTCACTTTATGGTTTAGGCACAGAGCTAGAGTTTCACAGTCTGTTGCACGAAGCCAACTCCCCTCTTAGTAAACATATACCTAATGTTTTGGCCAGTGGAATTCTTTATCTTGAAAATGGATCCAGTACCAATTCAAGTTGGGACGGAAAAGGAGTTCCTGATGTCATTATGAAAAATAATCTGATCAGTAGGAAATGCGGTGTTGATGATTTCTCATTTGGGGTGTGGGGTAAGAAACAATTAGAGTATAGGACTGCTGGGATGCCGGTAGATGGATCAGGTAACTTGGCTGGTAATTCAAGCATATGGCCATATGTGATAACAAAACGATGTGAAGGGAATATGTTTGCAGAATTAAGAGACAAACTGACATGGGAAGATACAACAAACTTGGCCTCATTCTTGGGGGAGCAGCTGCGCTATCTTCATCTTTTGTCATATCCACCTCCAAATATTTCTTCTTTCACTGATATTGATCATGAATTAAGCTTGGTTGAGGCTAATGGTTGCGTTGCAACTGGTGACTGTAAATCAAATGTTACAGCAGAATGGTGGCTCTTCACCAGAACCTTAACAAAGATGAGGAAAGATGTGTCTAGCCGTTTGACTAAGTGGGGAGATCCAATTCCTAGCAAACTGATACAGAAGATTGATGAATATATCCCACATGATTTTGCTGAGAATTTTGGAAACGATGCTTGTAAACCTTGCTCCTGGATACACACTGACATTATGGATGACAACATTTACATGAAACCATCCTTCGTTTGCTCTATCACTACTGGGAATAATGAAGATATCACCAGGGCGGACAGTGGTTTGTTGAGTAATTGTGGAGTAAAATCATGGTGTCCTAGTCATATTCTTGACTTCAGCGATCTTTCAATCGGTGATCCTCTTGTTGACTTGATACCAATTTATTTAGATGTGTTTAGAGGTGATTCACACCTCCTTAAGCAGTTTTTAGAAAGTTACAAACTCTCTTTTGTTAGTAACGTATCAAGGTGTAAGTTATCAGAGGGTGATCAAAAGTTTGGCCGACTTTCATATCTTGCCATGTGTTATTGTATCTTGCATGATGACAATGTACTGGGAGCTCTTTTTAGCATATGGGAAGAACTGAGATCAGCAGAGTCATGGGAAGAAGTTGAACTGACAGTGTGGGGGGAACTGAACAATTACAAAGGCTTTCCATGA 2889 0.4074 MNNEKDRRIEALGDFGVLPDEILCAILERFTPREVARVACVSSVMYILCNEEPLWMSLCLKGASGLLQYKGSWKKTALHNLNLPDKYNDYRRGPLYFDGFNSLFLYRRLYRCHTTLDAFYVDTGNVERIKDISLKDFYNEYDAKKPVMLSGLADTWPARHKWTTDQLLLNYGDVAFKISQRGARKISMKFKDYVSYMKIQHDEDPLYIFDEKFGEAAPTLLKDYCVPHLFEEDFFDILDTDKRPSYRWLIIGPERSGASWHVDPALTSAWNTLLCGRKRWALYPPGKVPLGVTVHVNEEDGDVNVETPSSLQWWLDFYPLLADEDKPIECTQLPGETIYVPSGWWHCVLNLETTIAVTQNFVNSNNFEFVCLDMAPGYHHKGVCRVGLLALDEDSYGNVKQNMPCNEENSSSSDLSRKEKRAKTQKDADDLYNGRAINGVSRSYNLWKDGFSYDINFLSMFLDKDRDHYSSHWSSGNSIGQRELREWLSKLWIQKPKIRELIWRGACIALNANKWLEYVSKICAFHNLPPPTDDERLPVGMGSNPVYLAGKSVVKIFVEGGLEASLYGLGTELEFHSLLHEANSPLSKHIPNVLASGILYLENGSSTNSSWDGKGVPDVIMKNNLISRKCGVDDFSFGVWGKKQLEYRTAGMPVDGSGNLAGNSSIWPYVITKRCEGNMFAELRDKLTWEDTTNLASFLGEQLRYLHLLSYPPPNISSFTDIDHELSLVEANGCVATGDCKSNVTAEWWLFTRTLTKMRKDVSSRLTKWGDPIPSKLIQKIDEYIPHDFAENFGNDACKPCSWIHTDIMDDNIYMKPSFVCSITTGNNEDITRADSGLLSNCGVKSWCPSHILDFSDLSIGDPLVDLIPIYLDVFRGDSHLLKQFLESYKLSFVSNVSRCKLSEGDQKFGRLSYLAMCYCILHDDNVLGALFSIWEELRSAESWEEVELTVWGELNNYKGFP 962
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01150 962 SUPERFAMILY Protein kinase-like (PK-like) 667 892 IPR011009 -
Spst9g01150 962 MobiDBLite consensus disorder prediction 400 427 - -
Spst9g01150 962 Pfam Cupin-like domain 143 365 IPR041667 -
Spst9g01150 962 Pfam F-box-like 18 61 IPR001810 GO:0005515
Spst9g01150 962 SUPERFAMILY F-box domain 10 64 IPR036047 GO:0005515
Spst9g01150 962 Gene3D - 9 88 - -
Spst9g01150 962 ProSiteProfiles F-box domain profile. 12 58 IPR001810 GO:0005515
Spst9g01150 962 PANTHER ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD 12 585 - -
Spst9g01150 962 FunFam F-box protein At1g78280 106 363 - -
Spst9g01150 962 Gene3D Cupin 110 363 - -
Spst9g01150 962 MobiDBLite consensus disorder prediction 412 427 - -
Spst9g01150 962 SUPERFAMILY Clavaminate synthase-like 124 370 - -
Spst9g01150 962 SMART cupin_9 210 373 IPR003347 -
Spst9g01150 962 ProSiteProfiles JmjC domain profile. 215 378 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01150 Spst-Chr9 10587873 10597185 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01150 4 958 Glycosyltransferase AT1G78280 60.472 0.0 1197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Spst9g01150 Cupin_8 8.5e-21 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01150 - - gmx:100792541 1769.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01150 9 10587873 10597185 Spst9g01150 9 10587873 10597185 ECH