Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01113 ATGCGTCGGGGGCCAGCTGGACCAAGGACTTTATGTAATGCATGCGGCCTTATGTGGGCTAACAAGGGTACACTCAGAGATCTCAGCAAGGGAGGAAGAAATCTTTCTGTTGAGCAAAGTGATCTGGACATTCCTATTGATGTCAAGCCTACTTCTGTTATTGAAGGGGAATTGCCAGGAATGCATGATGAGCAAGGTAGTTCTGAAGATCCGTCCAAGTCCAACATAGCTGATGGTTCTATTGGTCATGCACTAAATCCTAGTGATGAGGAATTGCCCGAAACTGCAGAAAACTTTCCGAAAGCTCTGCCACAAGGGCTTGGTCATTCTTCAACAAATGATACTGAACAGGAACCTCTGGTCGAACTTTCTAATCCTTCAGATACAGATATTGACATTCCAGGAAACTTTGATTAG 417 0.446 MRRGPAGPRTLCNACGLMWANKGTLRDLSKGGRNLSVEQSDLDIPIDVKPTSVIEGELPGMHDEQGSSEDPSKSNIADGSIGHALNPSDEELPETAENFPKALPQGLGHSSTNDTEQEPLVELSNPSDTDIDIPGNFD 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01113 138 Gene3D - 1 35 IPR013088 GO:0006355|GO:0008270
Spst9g01113 138 PANTHER GATA TRANSCRIPTION FACTOR 28 1 131 IPR045280 GO:0006355
Spst9g01113 138 CDD ZnF_GATA 1 31 IPR000679 GO:0006355|GO:0043565
Spst9g01113 138 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 1 32 - -
Spst9g01113 138 MobiDBLite consensus disorder prediction 46 138 - -
Spst9g01113 138 MobiDBLite consensus disorder prediction 105 124 - -
Spst9g01113 138 Pfam GATA zinc finger 1 24 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01113 Spst-Chr9 10148984 10151735 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01113 1 31 Tify Gene Family AT1G51600 90.323 3.18e-15 68.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Spst9g01113 GATA 1.8e-09 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01113 - - gmx:100801328 261.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01113 9 10148984 10151735 Spst9g01113 9 10148984 10151735 ECH