Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01103 ATGCCTCACAGAACCACATACTTTTTCCCGCGTCAATTCCCGCAGCGAGGGTTGGATGAATCTTCCAAACCGCTATTAGATCACGAGAAAAAGAAAATCGTAAACTCAATCAAACATGACACGCGTAGCGTCGAAAGCGACACTCCAAAAAAATCGCTTCCGACTAAAGATAACGACGTTGTTCTCTCCTCCGCCAAGCAATCCGCCGTCTCCGACCTATTCGAAGCCGGCGACAAGTTCCGGACCAAAAACAAGCAGATCGCCGCGTTCTGCGATTGGTTGATCGACAAGAAAGTCAGCCATTCCGACCACCACCACCGCGACGGCGACGGAGACCTACTTCTTCCGCCGGAAACCACCGTTAAGAACGCTGCAGTTGACCAGAGCTTCGACCGGCAGGTTTCTCTGCCGAGGCTATCGAGCGGGAGCAGCTATGCAGGAAGCTTGTTTTCGGGGACGACGTTGGATTGCAATTTTTCCAGCGACATTAAGGAGGAAACGTCGTCTTCTCGCACACTCACTACTATCGCTGCGACGAGGCACAAGGACGAGGAGGAAGAAGAGGAACTTAGCACGGAGAAGTGGGCGAAGAAGTCGAAAGAAAGCTATATCTTGCAACTCACGTTAGCGAAGAGGCTCAACTGCTTGGCTAGCCTTGTCACCGAACCAGTTCTCACTCCAGGAACCGAAACCTGGGATGCTGAATCCGTTTCTTACCGCCTATGGGTGAGTGGATGTTTATCTTATACGGACAAGATATCTGACGGGTTTTATAACATATTGGGGATGAATCCATATCTTTGGGTGATGTGTAATGATGTGGAAGAAGGTAGAAGGATACCTACTTTGATGGCGCTAAAAGCGGTTGAGCCCAGCGAGACTTGTATGGAGGTGGTGCTTGTTGATAGACGCGAGGACTCTCGCTTGAAGCTGCTTCAAGATAAGGCGCAAGAGTTGTATTGTGCTTCTGAGAACACCTTGGTGTTGGTGGAACAATTAGGGAAACTGGTAGCCATTTACATGGGGGGTATGTTCCCGGTGGAGCAAGGCGATCTTCACAAGCGCTGGAAGTTGGCTAGTAAGAAGTTGAGGAATTTTCACAAGTGTGTTGTGCTTCCCATTGGCAGCCTGTCTACTGGGCTTTGTAGGCATCGGGCAATTCTTTTTAAGAGATTGGCAGATTACATAGGTTTGCCCTGTCGCATTGCTCGTGGTTGCAAGTATTGTGTTGCAGATCATAGATCCTCTTGCCTAGTCAAAATTCAAGATGACAAGCAGCTCTCAAGGGAATATGTGGTCGACCTAGTTGGAGAACCAGGAAATGTCCATGGACCAGATTCCTCAATAAATGGAGCATATGTTTCTTCCATGCCCTCCCCGTTTCAAATTTCTCACTTAAAAGAATCACAATCACCTTATATGGATGACATGGCAAGTTCTGAATCTATATGTTCTAATGACAGACCTGTTAATCCTGAAAATCTTCCATATTCAGGCTGTGCAAATAATGTTCAACAAGCTAAAGAAACTGATTTCCTGAGAAGTCACAAGGACTCCGTTTATTCTTCAGTTGATCAAATCTGTGAAGGAACAGAACAATCTCTAATTTCTTTTGGGTTAGAAGGGAATGATGAGGAATGTGCAGTTCTTAGTTCGGTTTTGCCTACCATCCATGAAAATGATTCTAAAGCTCTTCATCTAGCCATTGAAGCACCATTACATGAATATCCAAGCCTTAGTGAAGATGTAGTACAAGTACAAGAAATTTCCAACAATGAGATCATTGTAAATGGAAGTTCTGTGGTGAAAAGTACTCGCAAGCAATCCATACTGGGTTCATCCAGCCAGTCAGAACTGAAACAGGTAGACAATAGAATTGAAAACAAGTGTTGTTTACCTGCTGGGAATATTCCAAGATATGTGAATCTTGAACCGTCACTTGCAATGGACTGGCTTGAGATATCATGGGAGGATTTACGGATTAAAGAGCGTGTTGGGGCTGGCTCATTCGGGACAGTGTACCGTGCTGAATGGCATGGATCAGACGTTGCTGTGAAGGTTTTAACAGTTCAGGATTTCCATGATGATCAGTTGAAGGAGTTCCTGCGAGAGGATCACTTTCAAAATGTGGTGCTCTTCATGGGGTCTGTTACAAAACGCCCCCATCTATCAATAGTGACAGAGTATTTGCCTAGGGGTAGTTTATACCGCCTAATACACAGACCAGCATCTAGTGAAATTCTGGATAAGAGGAGGAGATTAAGGATGGCTTTGGATGTGGCTAAAGGGATCAATTATCTCCACTGTCTGAAACCTCCAATTGTGCACTGGGATCTTAAATCCCCAAACTTGTTAGTGGATAAAAATTGGACTGTGAAGGTTTGTGATTTTGGATTGTCCAGATTTAAGGCAAACACTTTCATACCGTCCAAATCAGTTGCTGGAACAGTTAAGATTCTTCCCCTTCCTGAGTGGATGGCTCCAGAATTCCTTCGCGGAGAACCCTCCAATGAGAAATCTGATGTTTACAGTTTTGGAGTTATACTCTGGGAACTTGTGACAATGCAACAACCATGGAGTGGACTTAGCCCTGCCCAGGTGGTTGGAGCTGTCGCTTTCCAGAATAGGAGGCTTGCTATCCCTCCAAACATCTCTCCAGCATTGGCCTCCCTCATGGAATCTTGTTGGGCCGATGACCCTAGTGAGCGTCCGTCTTTTGGTGGCATAGTTGAGTCACTAAAGAAGCTGATCCGTGATCAGCACGAGAACCCAAAAATGGAGCCCGACGAGAAAAAAGCAATGATTCGCGATATCGCACTACAAATCGTTATCATCTTCATCGCCATCTTCTCCTTCCTCTGGATGCACGGCATTCCCCAGCGCCTCTTTGCCAAGCTCCGCCACCGCCCCCCAAATCCAAGCGCCGTCCAAGCCAAACGCCACTTCGTCAAAGGCGCACAACTGCTCGCGCAAGCCAGAAGATCCAAAACCACCTCCATCGCAACCTCCCTCGCTAAACAGGCCCTAGCGGAAGCCGAGAAGGCCATCGCGCTCGATCCGAAGGACGCCGCCTCGCACCTCTTGAAGTCCATGGCGCTCGATCTCCAGGGCTTCCGCAGTAACGCGCTCGACGCTCTTGACGCGGCGCTCTCTCCGCTCGCCGCGGCGTCGCTGGCGGCCGACGAGAGAGGCGACGCGCTGCTGAAGAGAGCGGAGCTGAAGATCGCGTTGAGCGAGCGGCGTGTTGACTCGGTACTGGCGGATTTGAATGAGTCGGTGAAGCTGAGTCCGCGGAACGCGAAAGCGTGGTGCATGTTGGGAGAGTGTTATGAGGGGAATGAGATGGGAGAGGAAGCGAAGAAGGCTTATAAAGAGGCTCTCGAGTTGGAGCCGCAATTGAATGCGGCTCAGGAAGCTCTCAACAGGTTGGGTTCTTCATAA 3441 0.483 MPHRTTYFFPRQFPQRGLDESSKPLLDHEKKKIVNSIKHDTRSVESDTPKKSLPTKDNDVVLSSAKQSAVSDLFEAGDKFRTKNKQIAAFCDWLIDKKVSHSDHHHRDGDGDLLLPPETTVKNAAVDQSFDRQVSLPRLSSGSSYAGSLFSGTTLDCNFSSDIKEETSSSRTLTTIAATRHKDEEEEEELSTEKWAKKSKESYILQLTLAKRLNCLASLVTEPVLTPGTETWDAESVSYRLWVSGCLSYTDKISDGFYNILGMNPYLWVMCNDVEEGRRIPTLMALKAVEPSETCMEVVLVDRREDSRLKLLQDKAQELYCASENTLVLVEQLGKLVAIYMGGMFPVEQGDLHKRWKLASKKLRNFHKCVVLPIGSLSTGLCRHRAILFKRLADYIGLPCRIARGCKYCVADHRSSCLVKIQDDKQLSREYVVDLVGEPGNVHGPDSSINGAYVSSMPSPFQISHLKESQSPYMDDMASSESICSNDRPVNPENLPYSGCANNVQQAKETDFLRSHKDSVYSSVDQICEGTEQSLISFGLEGNDEECAVLSSVLPTIHENDSKALHLAIEAPLHEYPSLSEDVVQVQEISNNEIIVNGSSVVKSTRKQSILGSSSQSELKQVDNRIENKCCLPAGNIPRYVNLEPSLAMDWLEISWEDLRIKERVGAGSFGTVYRAEWHGSDVAVKVLTVQDFHDDQLKEFLREDHFQNVVLFMGSVTKRPHLSIVTEYLPRGSLYRLIHRPASSEILDKRRRLRMALDVAKGINYLHCLKPPIVHWDLKSPNLLVDKNWTVKVCDFGLSRFKANTFIPSKSVAGTVKILPLPEWMAPEFLRGEPSNEKSDVYSFGVILWELVTMQQPWSGLSPAQVVGAVAFQNRRLAIPPNISPALASLMESCWADDPSERPSFGGIVESLKKLIRDQHENPKMEPDEKKAMIRDIALQIVIIFIAIFSFLWMHGIPQRLFAKLRHRPPNPSAVQAKRHFVKGAQLLAQARRSKTTSIATSLAKQALAEAEKAIALDPKDAASHLLKSMALDLQGFRSNALDALDAALSPLAAASLAADERGDALLKRAELKIALSERRVDSVLADLNESVKLSPRNAKAWCMLGECYEGNEMGEEAKKAYKEALELEPQLNAAQEALNRLGSS 1146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01103 1146 Gene3D Transferase(Phosphotransferase) domain 1 732 927 - -
Spst9g01103 1146 ProSiteProfiles Protein kinase domain profile. 659 917 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g01103 1146 Pfam Protein tyrosine and serine/threonine kinase 659 913 IPR001245 GO:0004672|GO:0006468
Spst9g01103 1146 SUPERFAMILY Protein kinase-like (PK-like) 637 912 IPR011009 -
Spst9g01103 1146 ProSitePatterns Serine/Threonine protein kinases active-site signature. 774 786 IPR008271 GO:0004672|GO:0006468
Spst9g01103 1146 ProSitePatterns Protein kinases ATP-binding region signature. 665 686 IPR017441 GO:0005524
Spst9g01103 1146 PRINTS Tyrosine kinase catalytic domain signature 768 786 IPR001245 GO:0004672|GO:0006468
Spst9g01103 1146 PRINTS Tyrosine kinase catalytic domain signature 727 740 IPR001245 GO:0004672|GO:0006468
Spst9g01103 1146 PRINTS Tyrosine kinase catalytic domain signature 840 862 IPR001245 GO:0004672|GO:0006468
Spst9g01103 1146 PRINTS Tyrosine kinase catalytic domain signature 884 906 IPR001245 GO:0004672|GO:0006468
Spst9g01103 1146 SMART tpr_5 1100 1133 IPR019734 GO:0005515
Spst9g01103 1146 MobiDBLite consensus disorder prediction 36 54 - -
Spst9g01103 1146 FunFam Serine/threonine-protein kinase CTR1 732 923 - -
Spst9g01103 1146 SUPERFAMILY TPR-like 1006 1138 IPR011990 GO:0005515
Spst9g01103 1146 CDD STKc_MAP3K-like 665 913 - -
Spst9g01103 1146 FunFam Serine/threonine-protein kinase isoform 1 649 731 - -
Spst9g01103 1146 Coils Coil 1068 1088 - -
Spst9g01103 1146 Gene3D Phosphorylase Kinase; domain 1 652 730 - -
Spst9g01103 1146 Gene3D Tetratricopeptide repeat domain 990 1145 IPR011990 GO:0005515
Spst9g01103 1146 MobiDBLite consensus disorder prediction 36 57 - -
Spst9g01103 1146 SMART serkin_6 659 917 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g01103 1146 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 193 920 - -
Spst9g01103 1146 ProSiteProfiles TPR repeat profile. 1100 1133 IPR019734 GO:0005515
Spst9g01103 1146 Pfam Ethylene-responsive protein kinase Le-CTR1 234 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01103 Spst-Chr9 10045851 10063315 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01103 1 918 MAP Kinase Kinase Kinase AT4G24480 55.828 0.0 1011
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Spst9g01103 PK_Tyr_Ser-Thr 3e-56 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01103 - - gmx:100808435 1591.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01103 9 10045851 10063315 Spst9g01103 9 10045851 10063315 ECH
Spst8g01134 8 10018593 10025676 Spst9g01103 9 10045851 10063315 PCT