Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01087 ATGTCGTGCTCATCGCGTGACCTTGGACTTCACTTCACTTCAATTAGACTGTCTCGCGACGTTAGGATGTACAGTAATCATGGAAGCTGTAGTTTTTGTCATAGGCAGGATTCTTCGACGCTCTTTTCCAGTGTACGTGCACCACTTGGGCCTATAGCTTCAAAATGTAATACTTTATTGTGGCGATGTTCCCTAATGCCGGCTGGAGGGTGTGAGGCCCCACTTGTGAAAATGGCTGTTGTTTCTTTGTCAAGGTCATATAATGCTATAGCAGGAAAATCAAGCGTCATTCAATTCATCCCTGCCCTTGGTATTATTGGCTTTGCTGTTTTTGGTCTCGAGCCACTTGTGCGCCTGAGCAGGAATCTGTTTCTCCAAGAAAGGACTGATAGAAGTTGGAAGAAAAGTAGTTTACATTATATTTTGACATCTTATTTTCAACCTTTGCTATTGTGGACTGGCGTGATGCTAATCTGCAGGGATGTAGATCCACTAGTCCTACCATCAAAAACTAGTCAGGCTATGAAGCAACGCCTGCTGAGTTTTGTAAGATCTTTGTCAACCGTGCTTACATTTGCTTACTGTTTTTCAAGCTTAATTCAACAAGCACAAAAGTTTTGTGCGGAGGCAAATGACTCCAGTGATGAAAGAAATATGAGTATTGATTTTACTGGGAAAGCTGTATATACTGCAATTTGGGTCGCTGCTGTGTCATTGTTCATGGAGTTGCTGGGTATCTCCACTCAGAAGTGGTTGACTGCTGGTGGTTTGGGCACAGTATTGATTTCCCTTGCAGGTCGGGAGATATTTACAAACTTCCTTTCAAGTATAATGATTCATGCAACGCGACCGTTTGTTGTGAATGAGCGGATTCAAACAAAAATTAAAGGATATGAGGTTACTGGTAAAGTTGAGCATGTAGGCTGGTGGTCACCAACAATAATTAGAGGTTCTGATTGTGAAGCAGTTCATATTCCTAATCACAATTTGAGTATAAATGTTGTGAGGAATCTTAGTAAGAAATCTCATTGGCGTATCAAGACTCACCTTGCCATCAGTCACTTGGATGTTAACAAGATTAATAGTATAATAGCTGATATGCGCAAGGTTTTGGCCAAACATCCTCAAGTAGAGCAGAGAAAATTGCACAGAAGGGTTTTTCTAGAGAATATTGATCCAGAAAATCAGGCTCTTATGATATTAGTATCCTGCTTTGTTAAAACTTCTCGTTCTGAAGAGTACCTCCGTGTAAAGGAGGCAATCCTCTTGGATCTTCTAAGAGTTATCAGTCATCATCGAGCTCGGCTAGCCACACCTATCCGCACAGTTCAGAAGATGTGCAATGATACTGATTTAGATATTGATCCATTTGATGACACCATTTCCTCTCGTTCCAGATCAAAGAAAAACCGTCCTTTCCCACTGATAGATCCACCTTATAAAGTTAAGTCTTCAAGTCATTTAACTGTTACAAATGAGGACAGAGATGGCAAGATGGATGAAACCTTGCCATCTGACTTCAAAGTAGACTCTGACGAATTTGTTGTGACATCGACTTCGGTCCAGAAGATCTCCAAATCCCAAACGCCCAAAAAGGAAAGAGCAGGAAGCACAGGAGAGGAAACAACATCCAAAATTTTGTCAACTTCTGATGGGTTTGGTTCTGGAGAAACTACTTCACCAGCAAAGCTAGATGGTGAGAAACCTGTTGTGTCCTCGTCATCATCATCAGTTAGTAGTTCTTTAGAAGAGAATATTATTCTTGATGCTGCTCTGTTGGGCTCAAAGAGAACTCTTGCAATTGATGAAGAATTGGTTCATATCCCTGCAGAGTCAGAAGAAGTTGCAGTCCATCAGAAGAATGGCAGGGAGCCTCCTCTTAGCGAGGATAAGAAGGATGGTGAGATGTCTTCATTGCCTACTACTAAACAAAAGGATTAA 1941 0.4137 MSCSSRDLGLHFTSIRLSRDVRMYSNHGSCSFCHRQDSSTLFSSVRAPLGPIASKCNTLLWRCSLMPAGGCEAPLVKMAVVSLSRSYNAIAGKSSVIQFIPALGIIGFAVFGLEPLVRLSRNLFLQERTDRSWKKSSLHYILTSYFQPLLLWTGVMLICRDVDPLVLPSKTSQAMKQRLLSFVRSLSTVLTFAYCFSSLIQQAQKFCAEANDSSDERNMSIDFTGKAVYTAIWVAAVSLFMELLGISTQKWLTAGGLGTVLISLAGREIFTNFLSSIMIHATRPFVVNERIQTKIKGYEVTGKVEHVGWWSPTIIRGSDCEAVHIPNHNLSINVVRNLSKKSHWRIKTHLAISHLDVNKINSIIADMRKVLAKHPQVEQRKLHRRVFLENIDPENQALMILVSCFVKTSRSEEYLRVKEAILLDLLRVISHHRARLATPIRTVQKMCNDTDLDIDPFDDTISSRSRSKKNRPFPLIDPPYKVKSSSHLTVTNEDRDGKMDETLPSDFKVDSDEFVVTSTSVQKISKSQTPKKERAGSTGEETTSKILSTSDGFGSGETTSPAKLDGEKPVVSSSSSSVSSSLEENIILDAALLGSKRTLAIDEELVHIPAESEEVAVHQKNGREPPLSEDKKDGEMSSLPTTKQKD 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01087 646 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 34 638 IPR045042 -
Spst9g01087 646 SUPERFAMILY Sm-like ribonucleoproteins 269 339 IPR010920 -
Spst9g01087 646 MobiDBLite consensus disorder prediction 610 646 - -
Spst9g01087 646 MobiDBLite consensus disorder prediction 519 581 - -
Spst9g01087 646 MobiDBLite consensus disorder prediction 540 557 - -
Spst9g01087 646 MobiDBLite consensus disorder prediction 488 505 - -
Spst9g01087 646 MobiDBLite consensus disorder prediction 458 505 - -
Spst9g01087 646 Gene3D - 284 337 IPR023408 -
Spst9g01087 646 Gene3D - 182 283 - -
Spst9g01087 646 Pfam Mechanosensitive ion channel 226 433 IPR006685 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01087 Spst-Chr9 9665533 9672283 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01087 22 604 Mechanosensitive Ion Channel Family AT1G58200 52.821 0.0 636
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01087 K22047 - gmx:100797302 1053.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01087 9 9665533 9672283 Spst9g01087 9 9665533 9672283 ECH