Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01085 ATGAACCCAAACAGAGCCGAAGCGGAACGCTTGCTTGCCATCGGCGAGAAGCTGCTCCAGAGTCGCGACCTGAGCGGCTCACGCGACTTCGCTATTCTCGCGCAGGAAGCCGAGCCGCTCCTCGACGGCTCCGATCAGATCCTTGCTATCGTCGACGTCCTCCTCGCCGCGGAGAAGCCGATCCACAACGGCCACCTCGATTGGTACGCCATTCTCCAAGTGGATCGCACGTGCCAGGACCTCGATCTCGTAAAACAACAGTACCGCAGACTCGGTCTTCTCCTTCACCCTGACAAGAACCCTTTCTCCCTCGCCGACCACGCTTTCAAGCTTGTCATCGATGCCTGGGCCATTTTATCCGACCCGGTTCAGAAAGATTTGTACGACCGAGACGTCACGGCTTCAGCCGAACCGGCGAGTTTCTGGACCGCGTGTCCGTATTGTTATTTTCTCTTCGAGTACCCTGCGCCTTGCGAGGGGCGTTGCCTGAGGTGCCAGAATTGCGAGAGATCGTTTCATGGGCTTTCGATTCCGTCGCTCCCCCCTCTAGTACCGGGCCAGGACGCCTATTATTGTAACTGGGGGTGCTTGCCCATGGGCTTTGTGTTTGGAACTCCGGACTCCAATGGGCCTGATCCCGGACCCGGATCCGAACCTGGGTCCATGGTCGAGAATGGCCCGAAGGTTGTTTCGAATGGGGCTGCTTCGAAATTGGGTTCCGGTTCTATGCGGAAGCGCGGAAGGCCGCGAAAGGGGGTGTGA 762 0.584 MNPNRAEAERLLAIGEKLLQSRDLSGSRDFAILAQEAEPLLDGSDQILAIVDVLLAAEKPIHNGHLDWYAILQVDRTCQDLDLVKQQYRRLGLLLHPDKNPFSLADHAFKLVIDAWAILSDPVQKDLYDRDVTASAEPASFWTACPYCYFLFEYPAPCEGRCLRCQNCERSFHGLSIPSLPPLVPGQDAYYCNWGCLPMGFVFGTPDSNGPDPGPGSEPGSMVENGPKVVSNGAASKLGSGSMRKRGRPRKGV 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01085 253 SMART dnaj_3 66 124 IPR001623 -
Spst9g01085 253 SUPERFAMILY Chaperone J-domain 61 131 IPR036869 -
Spst9g01085 253 Gene3D DnaJ domain 56 142 IPR036869 -
Spst9g01085 253 PRINTS DnaJ domain signature 88 103 IPR001623 -
Spst9g01085 253 PRINTS DnaJ domain signature 69 87 IPR001623 -
Spst9g01085 253 PRINTS DnaJ domain signature 104 124 IPR001623 -
Spst9g01085 253 CDD DnaJ 67 121 IPR001623 -
Spst9g01085 253 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 223 - -
Spst9g01085 253 Pfam DnaJ domain 67 129 IPR001623 -
Spst9g01085 253 MobiDBLite consensus disorder prediction 207 253 - -
Spst9g01085 253 ProSiteProfiles dnaJ domain profile. 67 132 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01085 Spst-Chr9 9654041 9654802 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01085 2 204 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 55.752 1.71e-85 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01085 - - gmx:100802055 416.001
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01085 9 9654041 9654802 Spst9g01085 9 9654041 9654802 ECH
Spst8g01143 8 10143247 10144266 Spst9g01085 9 9654041 9654802 PCT