Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01079 ATGGGATACCTCTCTTGCAATGCCCAATCCGCAATCGCCACCTGCGACCCTCACTTCAAGAAGCACAAACCCCTCGTTGTCAAACCAATCCGCCACTTTCACTACGCGGATCTCGCCGCCGCGGCTTCCGGTTTCTCCGCCGAGAGCTTCCTGGGCCGAGGCAGCCATGGCAGAGTGTACAAAGCCACCCTTGACGGCGGCAAGCTCCTCGCCGCCGTCAAAACCACGAAACTTGTTTCCTCTTCGAAGAACCACTCCATCAAATGCACCGGCTGCGGCAACTGCACTAGCCCCGCGGAAAACGAGATCGAGATCCTCTCTCAAGTTCCGAGCCAACGCGTCGTGAACCTCATCGGCTTCAGCACCGACCCAAACGGCAACAAATTGATCGTCGTTGAATACATGCCCAACGGTTCGCTCCACGATCTGTTACACACCGTTAAGAAACCGCCCGGTTGGAACCGGAGGGTCCGGTTCGCGGTTCAGGTTGCGAAAGCGGTTCTCGAATTGCACTCTTCCAACCCTCCCGTTATTCATCGCGACGTTAAGTCTTCCAATGTTTTAATTGACGAGAAATGGAATGCGAGGCTCGGTGACTTTGGCCTTGCGTTAAGGGGACACGTGGAGGACGTTCGTGTGAAGTGCACGCCGCCCGCGGGGACGTTAGGGTACCTCGACCCGTGCTATCTTGCACCGGAGGATCTCAGCTCCAAGAGCGATGTCTTCAGCTTTGGGATCTTGCTGCTGGAGATCATCAGCGGCCGGAACGCCATCGACGTCAATTACAGTCCTCCTTCGGTGGTGGACTGGGCGGTGCCACTGATCAAGCTCGGTGACTTCGCCGGAATCTGCGACCGCCGAATCGGACCCCCGCCGGACCCCGCCGTGGTGCGGCAGCTCGCTGTGCTGGCTGCCAGATGCGTGAGGTCGACGGCGGAGAAGCGGCCATCCATGACGGAGGTGGTGGAGTGTTTGAATCTGACGAGGAAGAGGATTCGTGCGTCCCCGGTGTGGATATCTCTGCGGCGGCGCGTGGCGCGTGTGGAGAGCGCCGTGCCTGTTGTGGCGTGGGAGGAGTGTGATGATAATAATAGTATTAATGATTGTGATAGGAGTGAGAAATTTGTGAGGATGGTGAAAGGTGGGAGTGTGAGTGGGAGCAGGAAGAAGGGGAAAGTATCTAGTGTGTGGGGTGTAGGGTATGGGAGTGAGGCCTCCAATAATAATAAAGTGACAAGGTCAAAGTCCATTGGTTCTGGTTCTGGTTCTGGTTCTGTGAGAGGGAGTTGGGTTAAAATGCAGCAGCCACACCAAAGCGAACATGGGTTTGGGAGAAGGAAGGTGAGGCTAAAAAAGTCAAAGTCTATGGGGGTTTTGCAAGGATCTGTACTTTCACATGGGGATTACTATAACAATATGCGTTATAATATTGATGATGTATTAGTAATTGGTTCTGCAATGGGCAAGTTGGTTGTTTCAGATAAGTTAGAAAAGAAAATGGTAGAAAAACCGTTAGTGAATTTGTATGATGAGGGTCGGAGCGTGAAGGAATGA 1554 0.5373 MGYLSCNAQSAIATCDPHFKKHKPLVVKPIRHFHYADLAAAASGFSAESFLGRGSHGRVYKATLDGGKLLAAVKTTKLVSSSKNHSIKCTGCGNCTSPAENEIEILSQVPSQRVVNLIGFSTDPNGNKLIVVEYMPNGSLHDLLHTVKKPPGWNRRVRFAVQVAKAVLELHSSNPPVIHRDVKSSNVLIDEKWNARLGDFGLALRGHVEDVRVKCTPPAGTLGYLDPCYLAPEDLSSKSDVFSFGILLLEIISGRNAIDVNYSPPSVVDWAVPLIKLGDFAGICDRRIGPPPDPAVVRQLAVLAARCVRSTAEKRPSMTEVVECLNLTRKRIRASPVWISLRRRVARVESAVPVVAWEECDDNNSINDCDRSEKFVRMVKGGSVSGSRKKGKVSSVWGVGYGSEASNNNKVTRSKSIGSGSGSGSVRGSWVKMQQPHQSEHGFGRRKVRLKKSKSMGVLQGSVLSHGDYYNNMRYNIDDVLVIGSAMGKLVVSDKLEKKMVEKPLVNLYDEGRSVKE 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01079 517 ProSiteProfiles Protein kinase domain profile. 45 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g01079 517 SMART serkin_6 45 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g01079 517 SUPERFAMILY Protein kinase-like (PK-like) 29 329 IPR011009 -
Spst9g01079 517 PANTHER OS01G0253100 PROTEIN 24 328 - -
Spst9g01079 517 Pfam Protein tyrosine and serine/threonine kinase 48 325 IPR001245 GO:0004672|GO:0006468
Spst9g01079 517 FunFam Serine/threonine-protein kinase-like protein 135 338 - -
Spst9g01079 517 Gene3D Phosphorylase Kinase; domain 1 8 134 - -
Spst9g01079 517 FunFam Serine/threonine-protein kinase-like protein 8 134 - -
Spst9g01079 517 ProSitePatterns Protein kinases ATP-binding region signature. 51 74 IPR017441 GO:0005524
Spst9g01079 517 Gene3D Transferase(Phosphotransferase) domain 1 135 337 - -
Spst9g01079 517 ProSitePatterns Serine/Threonine protein kinases active-site signature. 177 189 IPR008271 GO:0004672|GO:0006468
Spst9g01079 517 MobiDBLite consensus disorder prediction 408 446 - -
Spst9g01079 517 MobiDBLite consensus disorder prediction 408 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01079 Spst-Chr9 9574130 9575683 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01079 31 336 Receptor kinase-like Gene Family AT3G59420 40.514 5.50e-66 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Spst9g01079 PK_Tyr_Ser-Thr 1e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01079 - - gmx:100799382 738.028