Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01072 ATGGGAGAAGATTGGGGCACCTGGATACCACATCTGAAATTTGGATGGCAATCACCAAATTTGAACCCCTTTGATGTAGGGAAGCAAGATGGTATGTCTGCAGCCATGAACCCGGGCGTAAATATGGTCTCTACGAATGAGACAATACCTGCTTTTGCGTCCTCTGCAATACCTCATTTGCAGTTAGGACGTTCCAGCGAACCGGGTCCTTGGTGTTATTGTTTGCCTTCTTTTTCACAAGAATTTACCCCTGCTCCGAACATCACTGCTGAGGGAAAAACCCCTGCTGACCATGTGAAAGGTTTTGGGAACAAGATTGCTCCATTTGGTCAATCTAGCTCCCAACACAAACAATTTCTTGTCATTGACCAGACTGCTGGTCAAACAACTGTTGTTTATAGATCAAGGCTTGGGAGTCCCTGTGACTGCCTTGCTTCTTGGCATTCAAAGCTACATGGTGCTAACTTTTGGAGGGGGGATGAACCTTCTTTTAGAAGAGATTTGAATTTGAATCATATGACTGAACCAACTTTGGCTGACAAGGTTCTTGAGAATCATGAAACCAGCATTGAAAGCGAGATGCATGAAGACACAGAAGAAATTAATGCATTGCTTTACTCAGACAGTGATGACTATTCTACCCAGGATGATGATGATGAAGATGATGAAGTTACAAGCACTGGACACTCTCCCAGTACAATGACCACTCATGATAACTGCAAAACCTCTGGGGTTGAAACTGCAGAAGAAGTTGCGAGCTCTGCCGGGAAAACCAAGAAGAGGAAGGTATTGGATGGTTATTATGATGACATACAGCTCATTGATACTGCCAGTTCTCAGAATAGGAACGAATCTTCTGCCACAGATGATGACTTGGAATCAAGATGTTCTAGTAACAACAATGGTGGATCCTTGTCTGGCAATAAGAAGATGAAAAAGCAGAAGATTCAAGGTGTTCTGAGCATTCTGCGAACCATAATTCCTGGAGGGATAGATAAGGACCCGGTCATGGTACTCGATGATGCAATACGCAGCTTGAAATCATTGAAGCATAAGGCTCAAGCGCTCGGACTTGATGCCTTGTAA 1086 0.4383 MGEDWGTWIPHLKFGWQSPNLNPFDVGKQDGMSAAMNPGVNMVSTNETIPAFASSAIPHLQLGRSSEPGPWCYCLPSFSQEFTPAPNITAEGKTPADHVKGFGNKIAPFGQSSSQHKQFLVIDQTAGQTTVVYRSRLGSPCDCLASWHSKLHGANFWRGDEPSFRRDLNLNHMTEPTLADKVLENHETSIESEMHEDTEEINALLYSDSDDYSTQDDDDEDDEVTSTGHSPSTMTTHDNCKTSGVETAEEVASSAGKTKKRKVLDGYYDDIQLIDTASSQNRNESSATDDDLESRCSSNNNGGSLSGNKKMKKQKIQGVLSILRTIIPGGIDKDPVMVLDDAIRSLKSLKHKAQALGLDAL 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01072 361 PANTHER TRANSCRIPTION FACTOR BHLH145 8 359 IPR037546 -
Spst9g01072 361 MobiDBLite consensus disorder prediction 227 249 - -
Spst9g01072 361 MobiDBLite consensus disorder prediction 278 311 - -
Spst9g01072 361 MobiDBLite consensus disorder prediction 209 258 - -
Spst9g01072 361 MobiDBLite consensus disorder prediction 292 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01072 Spst-Chr9 9512087 9513172 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01072 23 351 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G09460 31.751 9.91e-22 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01072 - - pvu:PHAVU_009G038200g 571.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01164 8 10335974 10337110 Spst9g01072 9 9512087 9513172 PCT