Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01055 ATGAAAGGTGAATACGTAGAACAACACCAACATTCTAAGACTGAAACACCACCTAGTATGTTCTCAAAGCTTCAACCTCAACATCATCCTTTTCCGCACCATCCTTTCCAACTCTCTGCGGAGGACGACACTCGTGCCATCGTTGCCACACCCACTACTGCACCCAACCCCAACTCCTCTGGCGGCGATGGCTCCACCATTGAGGTCGTGCGCCGTCCCAGGGGCCGTCCTCCTGGCTCCAAAAACAAACCCAAGCCACCTGTCATCATAACGCGCGACCCTGAACCGGCTATGAGTCCCTACATTTTAGAAGTGTCTGGGGGCAACGATGTCGTCGAGGCCATCGCGCAGTTCAGTCGGCGCAAGAATATGGGTATCTGTGTCCTCACGGGTTCTGGGACCGTCGCTAACGTCACGCTCCGTCAACCCTCAACTACGCCGGGCGCCACCGTTACTTTCCATGGCCGTTTTGATATCCTCTCTGTCTCTGCCACCTTCCTTCCGCAGCAATCCGGCGCGTTCCCGGCTGTTCCCAATGGATTCGCTATCTCCCTCGCCGGACCGCAGGGGCAGATCGTCGGGGGAATGGTCGCCGGCGGGTTGATAGCAGCCGGAACGGTGTTCGTGATTGCCGCTTCGTTCAACAATCCTGCATATCACAGGCTACCTCCGGAAGAGGAGGGGGCCTCTGCGGATGGGCATTCGCCGCCAGTCTCCGGTGGCGGAGAAAGCGGGCATGGGCAAGCAGAGTCGTGTGGAATGTCCATGTACAGCTGTCACTTGCCTTCTGACGTGATTTGGGCTCCGACGGCCAGAGCACCGCCGCCACCGCCACCTTACTGA 843 0.5813 MKGEYVEQHQHSKTETPPSMFSKLQPQHHPFPHHPFQLSAEDDTRAIVATPTTAPNPNSSGGDGSTIEVVRRPRGRPPGSKNKPKPPVIITRDPEPAMSPYILEVSGGNDVVEAIAQFSRRKNMGICVLTGSGTVANVTLRQPSTTPGATVTFHGRFDILSVSATFLPQQSGAFPAVPNGFAISLAGPQGQIVGGMVAGGLIAAGTVFVIAASFNNPAYHRLPPEEEGASADGHSPPVSGGGESGHGQAESCGMSMYSCHLPSDVIWAPTARAPPPPPPY 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01055 280 ProSiteProfiles PPC domain profile profile. 95 235 IPR005175 -
Spst9g01055 280 MobiDBLite consensus disorder prediction 49 65 - -
Spst9g01055 280 FunFam AT-hook motif nuclear-localized protein 99 233 - -
Spst9g01055 280 Gene3D - 99 234 - -
Spst9g01055 280 MobiDBLite consensus disorder prediction 221 249 - -
Spst9g01055 280 PIRSF ESCAROLA 7 270 IPR014476 GO:0003680
Spst9g01055 280 Pfam Plants and Prokaryotes Conserved (PCC) domain 100 216 IPR005175 -
Spst9g01055 280 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 45 253 IPR014476 GO:0003680
Spst9g01055 280 SUPERFAMILY AF0104/ALDC/Ptd012-like 97 230 - -
Spst9g01055 280 MobiDBLite consensus disorder prediction 1 94 - -
Spst9g01055 280 CDD DUF296 100 214 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01055 Spst-Chr9 9406313 9407155 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01055 1 276 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 60.201 8.15e-104 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01055 - - gmx:100788098 466.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01055 9 9406313 9407155 Spst9g01055 9 9406313 9407155 ECH