Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01050 ATGCAGGTCTATGGACTGCCTTGCGGGAGCGGCTTCGACCACAACATCAAGGTCAGGCAAGGGAACAAGTTTCTCTCAACAGGAGCAAAATCAGATGGCGACCGCCACCAACGGATACATTTAAATGCAATGTGCCGGAGGAATCACCGTTGTCGTTTTGTTCAAGCTTTTGTTGATTATAAATTATTTTTTCCACAAGTACATCAAAGAGAGATATTGGCTTTGTTAGCAGCACTCAAGTGGCCAAAAAATATTGAATTACACTGCCAGAGTTGTGTGGTGGTGGAAAATGGCATACTAAAAGTCACCTTATCAAATCCTGGGGGAATTGTGACTGGAATACAGTACAATGACATCGACAACTTGCTTGAAGTTTTGAATGAAGAATCTAATAGAGGGTATTGGGACCTTGTTTGGAGCTCACCGACAAGTACAGGAACCAGTGGTACATTCGATGTCATCAAAGGAACATCATTCCAAGTTATGGTTGAAAATGAGGACCAAGTTGAGTTATCCTTCACCAGGACATGGGACGTCTCTCTTGAGGGCAAGTTGGTTCCTTTAAATATCGACAAAAGGTTCATAATGCTTCGTGGTTGTTCGGGGTTCTACTCCTATGCAATTTATGAGCACTTAGAGGAGTGGCCTGCTTTCAATCTTGACGAAACAAGAATTGCTTTCAAGCTTAGAAAAGACAAGTAG 702 0.4245 MQVYGLPCGSGFDHNIKVRQGNKFLSTGAKSDGDRHQRIHLNAMCRRNHRCRFVQAFVDYKLFFPQVHQREILALLAALKWPKNIELHCQSCVVVENGILKVTLSNPGGIVTGIQYNDIDNLLEVLNEESNRGYWDLVWSSPTSTGTSGTFDVIKGTSFQVMVENEDQVELSFTRTWDVSLEGKLVPLNIDKRFIMLRGCSGFYSYAIYEHLEEWPAFNLDETRIAFKLRKDK 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01050 233 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 83 233 - -
Spst9g01050 233 Pfam Rhamnogalacturonate lyase family 90 233 IPR010325 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01050 Spst-Chr9 9375989 9379135 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01050 85 233 Polysaccharide Lyase AT1G09910 68.667 3.79e-66 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01050 K18195 - gmx:100814721 273.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01050 9 9375989 9379135 Spst9g01050 9 9375989 9379135 ECH