Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01043 ATGGTGTTGAGGAAAGTGGGGAAGTATGAGATTGGGAGGACGATTGGGGAGGGAACTTTTGCGAAGGTGAAATTCGCTCAGAACACAGAAACTGGAGAGAGCGTGGCCATGAAGGTGCTCGACCGTAGCACCATCATCAAACACAAGATGGTCGACCAGTTAGGCATCCTTATGTTGTTCGCCTGTACGAGGCATGTTCTTGCAAGCCGTACTAAGATTTATATCATATTGGAGTTCATCACGGGTGGTGAATTGTTCGATAAAATTATACACCATGGCCGTCTTAGTGAAGCTGATTCTAGAAGATATTTCCAACAGCTTATTGATGGTGTAGATTATTGCCACAGTAAGGGTGTTTATCACAGAGATTTAAAGCCTGAAAATCTTTTACTTGATTCACTAGGAAATATAAAGATTTCCGATTTTGGTTTGAGTGCATTGCCTGAACAGGGAGTGAGTATCCTACGAACAACCTGTGGGACTCCAAACTACGTAGCTCCTGAGGTACTCAGTCATAAGGGTTACAACGGTGCTGTGGCAGATGTTTGGTCCTGTGGGGTTATTCTGTATGTCCTACTGGCTGGATATCTTCCCTTTGATGAGCTTGATCTAAACACCTTATATAGTAAGATTGACAGAGCAGAATATACATGCCCTCCTTGGTTTCCCGTGGGAGCCAAATCATTGATAAATAGAATTTTGGACCCAAATCCTGAAACTCGTATAACCATTGAACAGATAAGAAATGATGAATGGTTTCAGAGGAGCTATGTTCCTGTTAGTCTTCTTGAGTATGAAGATGTAAATCTTGATGATGTAAATGCTGCTTTTGATGAGGCTGAGAGGGCTGATCAACACTGTGATAACGAGGACATGGCACCTCTAATGCTTAACGCATTTGACTTGATAATTCTGTCTCAAGGCTTAAATCTTGGAACAATCTTTGATCGTGGACAGGACTCTGTGAAGTATCAAACCCGCTTTATCACTCAAAAGCCAGCAAAGGTGGTTTTATCAAGTATGGAAGTGGTGGCACAATCAATGGGATATAAGACACACATTCGCAACTACAAGATGAGGGTAGAGGGTGTTTCAGCAAATAAAGCATCCTATTTCTCGGTCATCCTGGAAATTTTTGAAGTGGCTCCTACATTTTATATGGTGGACATTCAAAAAGCAGCTGGAGATACTGGTGAATACCTCAAGTTTTACAAGAACTTTTGTAGCAATCTTGAGGATATAATCTGGAAACCACCTCATGAACCAAGCAAATCAAGGATCTCCAAGACCAATATCAAAAGACGATAA 1308 0.4151 MVLRKVGKYEIGRTIGEGTFAKVKFAQNTETGESVAMKVLDRSTIIKHKMVDQLGILMLFACTRHVLASRTKIYIILEFITGGELFDKIIHHGRLSEADSRRYFQQLIDGVDYCHSKGVYHRDLKPENLLLDSLGNIKISDFGLSALPEQGVSILRTTCGTPNYVAPEVLSHKGYNGAVADVWSCGVILYVLLAGYLPFDELDLNTLYSKIDRAEYTCPPWFPVGAKSLINRILDPNPETRITIEQIRNDEWFQRSYVPVSLLEYEDVNLDDVNAAFDEAERADQHCDNEDMAPLMLNAFDLIILSQGLNLGTIFDRGQDSVKYQTRFITQKPAKVVLSSMEVVAQSMGYKTHIRNYKMRVEGVSANKASYFSVILEIFEVAPTFYMVDIQKAAGDTGEYLKFYKNFCSNLEDIIWKPPHEPSKSRISKTNIKRR 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01043 435 FunFam Non-specific serine/threonine protein kinase 2 293 - -
Spst9g01043 435 ProSiteProfiles NAF domain profile. 292 316 IPR018451 GO:0007165
Spst9g01043 435 Pfam NAF domain 294 352 IPR004041 GO:0007165
Spst9g01043 435 FunFam Non-specific serine/threonine protein kinase 291 417 - -
Spst9g01043 435 SUPERFAMILY Protein kinase-like (PK-like) 6 279 IPR011009 -
Spst9g01043 435 CDD CIPK_C 298 413 - -
Spst9g01043 435 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Spst9g01043 435 ProSitePatterns Protein kinases ATP-binding region signature. 15 47 IPR017441 GO:0005524
Spst9g01043 435 ProSiteProfiles Protein kinase domain profile. 9 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g01043 435 Pfam Protein kinase domain 9 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g01043 435 Gene3D Kinase associated domain 1, KA1 296 417 - -
Spst9g01043 435 SMART serkin_6 9 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g01043 435 Gene3D Transferase(Phosphotransferase) domain 1 4 295 - -
Spst9g01043 435 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 7 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01043 Spst-Chr9 9317392 9322285 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01043 1 377 CBL-interacting serine-threonine protein kinases AT4G24400 77.519 0.0 624
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Spst9g01043 Pkinase 9.4e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01043 - - gmx:100785444 798.89