Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01020 ATGTCAATGTTCGCGAGCACGCCCCAGCAGAATGTTGAGAAATCGTTCGAGGCGTTCTACGAGGGGTGGCTTGCGCGGCACGAGATTTTGTTTGAGCAGCTTCAGAGTGTGACGCCTGATGATGACAGTGTTCAACAGAGGAAGCTGATAGAGCAAGTTCTGTGTCACTATGAGCAATTTTTGGAAGAGAAATCGAACGTGGCGAACGGCGACGTTTTCATTCTCTTTTCCTCGCCCTGGCTTTCTTCCTACGAGAGGTCTCTGCTCTGGAATGGGGACTACAAGCCCTCGCTCATTCTCCGTCTCGCGGACGGCGCCGTCAAGAGCTTAACGCCAGAGCAGAGGGAGAAAATGGAGCGTGTGAGAGACGAGACGAAGCGAGCCGAGAGAGAGGTTTCCGAGGCAATGGCTTCCGTTCAAGAGAGCATGGCGAGTCCGCACATGGTGGCGCTTATCAGAATGGTTGACGGCGAGAAAACGGAGCAGGAAACGGCTCTTCAGGGTCTCAAGGAGGCGCTTAAGAAGGTTTCCGAGAGAGGAGACGCGCTCCGCGCGTTGACGATGAAGAAGGCGGTGGAGATCTTAAGCCCGCCGCAGACGGTGCAATTATTGACGGCGACGATGCGATTTCAGATGCGCGTAAGGAAGTACGGTTTGCACCGAGACGAGGTTGGACCGTCACATTGA 687 0.5459 MSMFASTPQQNVEKSFEAFYEGWLARHEILFEQLQSVTPDDDSVQQRKLIEQVLCHYEQFLEEKSNVANGDVFILFSSPWLSSYERSLLWNGDYKPSLILRLADGAVKSLTPEQREKMERVRDETKRAEREVSEAMASVQESMASPHMVALIRMVDGEKTEQETALQGLKEALKKVSERGDALRALTMKKAVEILSPPQTVQLLTATMRFQMRVRKYGLHRDEVGPSH 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01020 228 ProSiteProfiles DOG1 domain profile. 13 224 IPR025422 GO:0006351|GO:0043565
Spst9g01020 228 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 15 223 - -
Spst9g01020 228 Pfam Seed dormancy control 40 102 IPR025422 GO:0006351|GO:0043565
Spst9g01020 228 Coils Coil 159 179 - -
Spst9g01020 228 Coils Coil 111 138 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01020 15 215 Calmodulin-binding Proteins AT1G77920 28.780 1.79e-18 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01020 - - pvu:PHAVU_009G114600g 307.76