Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01019 ATGTCAGTACATAAAGTTAACGCGGAGGAGTTGGAATTGAAAGACCCAAATGAAAACCATCTCGCACTCATTTTCTTTCACTCTCCAAACATGTTCGCCACCTTCCGAGTCCTTCTTCTTCTCTCACTCTTTTATCCACTCACCACCGCCCAACTCGACCACGACCACGACCGTCAAATCCTTCTCAACCTAAAATCCTCCCTCAAGAATTCAAATTCAAAAGTGTTTGACTCATGGAATGCCACCAGCTCCGTTTGCAGTTTCCACGGAGTAACATGCAACACCCTCGGTTCCGTAACCGAAATCAACCTCCCCAACCAAACTCTAACCGGGCTTCTCCCATTCGACTCTCTCTGCAACCTTCCATCGCTCCAGAAACTTGCGTTCGGCTTCAACTACTTGTACGGCAATGTTTCAGAGGACCTTAGAAACTGCGTCAACTTGCGGTACTTGGATTTGGGAAACAACCTTTTCTCTGGTCCCTTCCCCGACATATCTCCTCTTAATCAGTTGCAGTACTTGTTTTTAAACAAAAGTGGATTTTCCGGAACTTTTCCGTGGCAGTCGCTGTTAAACATGACGGGTCTGTTGCAGTTAAGTGTCGGAGATAACCCTTTCGATCTCACGCCGTTTCCCAAAGAGGTTGTCAGTCTCAAGAAGCTGAATTGGCTCTACCTGTCGAACTGCACCCTCGGAGGGAAACTTCCGGTGGGACTCGGCAACCTCACAGAGCTCACCGAATTGGAATTCTCCGACAATTTCATCACCGGCGATTTTCCCGCGGAGATTGTGAACCTATGGAAACTCTGGCAGCTTGTGTTCTTCAACAATACCTTCACGGGGAAGATTCCAACCGGGTTGAGAAACCTCACGGGGCTTGAGTATTTGGATGGGTCCATGAATAGACTCGAAGGGGATCTCTCTGAATTGAAGTACTTGACCAATCTGGTTTCGCTGCAATTTTTTGAAAACAATTTATCGGGGGAGATTCCAATTGAGATAGGCGAATTCAAACGCCTCGAGGGTCTCTCTCTGTACAGGAACAAATTGACAGGTCCTATTCCTCAGAAGGTTGGTTCCTTGTCCGACTTTAATTTCATTGACGTGTCGGAGAATTTCTTGTCGGGAACTATTCCCCCGGATATGTGTAAAAATGGGAAGATGACCGCACTGCTCGTGCTTCAGAACAAACTCTCCGGCAGGATTCCGGCCACCTACGGAGACTGTTCGAGTCTGAAGCGATTCAGAGTCAGCAATAACTCTCTCTCGGGTACCGTGCCTCCTGCGATTTGGGGATTGCCCAACGCTGAAATTATCGATATTGAGTTGAATCAGTTGGAAGGTTCGGTTGCTTCGGATATCAAAAACGCCAAAACATTAGCTTCAATATTCGCGAGGCAGAACCGGTTGTCCGGTGAAATACCCGAAGAAATCTCAAAAGTGACGTCGTTGGTGAGTATGGACCTGAGCGAGAATCAGATTTCGGGGAAGATTCCAGAAGGAATCGGGGAGCTTAAACAACTAGGTAGCCTTCATTTACAGAGCAATAGGTTATCAGGTTCGATACCGGAATCTCTCGGTTCCTGTAAATCCCTCAACAACATTGACATATCGAGGAATTCACTCTCTGGAGAAATCCCTACCTCATTGGGTTCTTTTCCCTCGCTGAATTCTCTGAATCTTTCAGACAACGATCTCTCTGGTGAAATCCCAGGGAGTTTAGCGTTCCTCAGGTTAAGCCTCTTTGACCTATCGCATAACTGGCTAACCGGTCCAATTCCGCAGGCTCTAATCCTCGAAGCTTACAACGGAAGCCTCGCCGGAAACCCCGGTTTGTGCAGCGTGGACGCGATTAACTCCTTCCCGCGTTGCTCACCTTCCTCTGGCATGTCCAAGGACATGCGTGTTCTCGTCATTTGCTTCGCGATAGCGTCAATATTGTTGCTTTCGTGTTTGGGAGTCTTCTTGCAGCTGAAAAGGAGGAAGGAGGAGGGAGAGAGATTCGGAGAACGTTCGTTGAAGGAGGAATCCTGGGACGTGAAATCGTTCCACGTGTTAAGTTTCTCGGAGGGGGAGATTCTAGATTCCATTAAGCAGGAGAATCTGATAGGGACAGGAGGTTCGGGGAACGTGTATAGAGTGACGCTTTCCAACGGGAAAGAACTGGCCGTGAAGCATATTTGGAACACCGATGTCCCAGCTCGGAGAAAGTCGTGGAGTAGCACTCCCATGCTTGGGAATAAGCGGGGTGGGAAGTCAAAGGAGTTCGATGCAGAGGTTCAGGCTCTGAGCTCCATAAGGCACGTGAATGTGGTGAAGCTCTTTTGCAGCATAACGAGTGAAGATTCGAGCTTGTTGGTGTACGAGTATTTACCCAATGGAAGCTTGTGGGATCGGCTTCACACGAGTAGAAAGATGGAGCTTGATTGGGAAACGAGGTATGAAATCGCGGTCGGGGCGGCCAAAGGATTGGAGTATTTACATCATGGGTGCGAAAGGCCCGTGATTCATAGAGATGTCAAGTCCAGTAACATCTTGTTGGATGAGTTTTTGAAACCTAGGATTGCGGATTTTGGGCTTGCTAAGGTTGTTCAAGCCAACGTTGGCAAGGATTCTTCCACACGTGTCATTGCCGGAACCCACGGTTACATTGCTCCTGAATATGGTTACACGTACAAAGTGAATGAGAAGAGTGATGTGTACAGCTTTGGAGTGGTGCTGATGGAACTAGTAACTGGAAAAAAGCCAATTGAAGCAGAATTTGGGGAGAATAAGGACATGGTGAGTTGGGTCCATAACAAGGCACGGAGCAAAGAGGGTCTTAGGAGTGTTGTGGATTCGAGGATCCCAGAGATGTACAAAGAGGAAGCTTGCAAGGTTTTGAGAACCGCGGTTCTGTGCACTGCAACTCTTCCTGCTTTAAGACCCACCATGAGAGCTGTGGTTCAAAAACTTGGCGATGCTGAGCCTTGTAAACTGGTTGGAATTGTTATTAGCAAAGACAGTGGCGAAAAGAAAATAGGAGTCAACGACAAGTAA 3039 0.4775 MSVHKVNAEELELKDPNENHLALIFFHSPNMFATFRVLLLLSLFYPLTTAQLDHDHDRQILLNLKSSLKNSNSKVFDSWNATSSVCSFHGVTCNTLGSVTEINLPNQTLTGLLPFDSLCNLPSLQKLAFGFNYLYGNVSEDLRNCVNLRYLDLGNNLFSGPFPDISPLNQLQYLFLNKSGFSGTFPWQSLLNMTGLLQLSVGDNPFDLTPFPKEVVSLKKLNWLYLSNCTLGGKLPVGLGNLTELTELEFSDNFITGDFPAEIVNLWKLWQLVFFNNTFTGKIPTGLRNLTGLEYLDGSMNRLEGDLSELKYLTNLVSLQFFENNLSGEIPIEIGEFKRLEGLSLYRNKLTGPIPQKVGSLSDFNFIDVSENFLSGTIPPDMCKNGKMTALLVLQNKLSGRIPATYGDCSSLKRFRVSNNSLSGTVPPAIWGLPNAEIIDIELNQLEGSVASDIKNAKTLASIFARQNRLSGEIPEEISKVTSLVSMDLSENQISGKIPEGIGELKQLGSLHLQSNRLSGSIPESLGSCKSLNNIDISRNSLSGEIPTSLGSFPSLNSLNLSDNDLSGEIPGSLAFLRLSLFDLSHNWLTGPIPQALILEAYNGSLAGNPGLCSVDAINSFPRCSPSSGMSKDMRVLVICFAIASILLLSCLGVFLQLKRRKEEGERFGERSLKEESWDVKSFHVLSFSEGEILDSIKQENLIGTGGSGNVYRVTLSNGKELAVKHIWNTDVPARRKSWSSTPMLGNKRGGKSKEFDAEVQALSSIRHVNVVKLFCSITSEDSSLLVYEYLPNGSLWDRLHTSRKMELDWETRYEIAVGAAKGLEYLHHGCERPVIHRDVKSSNILLDEFLKPRIADFGLAKVVQANVGKDSSTRVIAGTHGYIAPEYGYTYKVNEKSDVYSFGVVLMELVTGKKPIEAEFGENKDMVSWVHNKARSKEGLRSVVDSRIPEMYKEEACKVLRTAVLCTATLPALRPTMRAVVQKLGDAEPCKLVGIVISKDSGEKKIGVNDK 1012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01019 1012 ProSitePatterns Protein kinases ATP-binding region signature. 703 725 IPR017441 GO:0005524
Spst9g01019 1012 Gene3D Ribonuclease Inhibitor 212 310 IPR032675 -
Spst9g01019 1012 Pfam Leucine rich repeat N-terminal domain 54 94 IPR013210 -
Spst9g01019 1012 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 51 985 - -
Spst9g01019 1012 Gene3D Ribonuclease Inhibitor 311 382 IPR032675 -
Spst9g01019 1012 ProSitePatterns Serine/Threonine protein kinases active-site signature. 835 847 IPR008271 GO:0004672|GO:0006468
Spst9g01019 1012 SMART serkin_6 697 992 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g01019 1012 Pfam Leucine rich repeat 507 566 IPR001611 GO:0005515
Spst9g01019 1012 SUPERFAMILY L domain-like 55 380 - -
Spst9g01019 1012 Gene3D Phosphorylase Kinase; domain 1 680 790 - -
Spst9g01019 1012 Gene3D Ribonuclease Inhibitor 383 497 IPR032675 -
Spst9g01019 1012 Gene3D Ribonuclease Inhibitor 498 620 IPR032675 -
Spst9g01019 1012 SUPERFAMILY Protein kinase-like (PK-like) 688 985 IPR011009 -
Spst9g01019 1012 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 387 627 - -
Spst9g01019 1012 FunFam Receptor-like protein kinase 7 138 386 - -
Spst9g01019 1012 FunFam Receptor-like protein kinase HAIKU2 680 790 - -
Spst9g01019 1012 SUPERFAMILY L domain-like 307 621 - -
Spst9g01019 1012 Gene3D Transferase(Phosphotransferase) domain 1 791 993 - -
Spst9g01019 1012 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 791 1000 - -
Spst9g01019 1012 ProSiteProfiles Protein kinase domain profile. 697 992 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g01019 1012 Pfam Protein kinase domain 699 983 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g01019 1012 Gene3D Ribonuclease Inhibitor 53 211 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01019 Spst-Chr9 9101735 9104880 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01019 30 1005 Receptor kinase-like Gene Family AT1G09970 61.672 0.0 1171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Spst9g01019 Pkinase 1.3e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01019 - - gmx:100779554 1683.69