Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01017 ATGAACCATCATCCCTTCATCACCCTCTTATCTACTATACTCATCGTTTGCACCACCACCGTCTCACTCTCACAGGTTATCAACACCAGTAGCAGCACCAAGAACCAGTCACAGTTTTTCTCTCTCATGAAGATGTCTCTCTCGGGGAAGTACCCTATGGATTGGGACGCTGGGAAATCCGTGTGTGGCTTCACCGGAGTTACCTGCAATACCAAAGGTGAGGTTATCAGCCTCGACCTTTCAGGTTGGTCATCACTTTCGGGAAAGTTCCCATCGGATACATGCTCTTACCTCCCAGAGTTACGTGTTCTCCGCCTCGGCCACGCCAGGTTCAAGTTCAACGTGGACACCATCCTTAACTGTTCCCACTTGGAAGAGCTTAACATGAACCACATGTTCCAGACCGGCACACTCCCTGATTTCTCTTCCTTGAAATCTCTCAGGATTCTCGACTTGTCCTACAACGTCTTCACAGGCCAGTTCCCCATGTCAGTGTTCAACCTCATCAATCTCGAGGTTCTAAACTTCAATGAAAACGGAGGCTTCAACCTGTGGCAGTTACCTGCAGATATTGACAGGTTGAAAAATCTCAAGTCCATGGTGCTGACAACGTGCATGGTGCATGGTCAAATCCCTGCATCCATAGGGAACATAACCTCCCTCGTCGATCTTGAGCTGAGTGGGAATTTTCTCACGGGACAAATTCCGAAAGAGCTTGGTCAGCTGAAGAACCTTCAACAACTTGAGCTTTACTATAATTACCATCTCGTTGGGAACATTCCAGAGGAGTTGGGGAACCTCACGGAGCTCGTGGATTTGGATATGTCAGTGAACAAGTTCACTGGGAGTATCCCTGCGTCGGTGTGTAGGCTTCCAAAGCTTCAAGTCTTGCAGCTCTACAACAACAGCCTCACAGGAGAAATCCCAGGTGCGATTGAAAACTCAACAGCTTTGAGAATGTTGTCTCTCTACGACAACTTCCTTGTAGGACAGGTTCCCAAGAAACTGGGACAGTACTCTGGAATGTTAGTTCTTGACTTGTCGGAGAACAAGTTTTCTGGTCCGTTGCCAACCGAGGTTTGCAAGGGAGGTACGCTAGAGTACTTTCTCGTTCTGGATAACATGTTTTCTGGAGAGATACCACAGAGTTATGCGAACTGCATGAGGCTCTTGAGGTTTAGAGTAAGTAACAACCGTTTGGAGGGTTCCATTCCCGCGGGACTTCTTGGTTTGCCACACGTTTCAATCATTGATTTGAGTAACAATAACTTGACTGGTCCGATTCCCGAGATTAACGGGAATTCTAGAAACCTGTCCGAACTGTTCCTTCAGAGGAACAAGATTTCAGGTGTCATAACTCCCACAATATCACGAGCCATAAGCCTGGTCAAGATAGATTTCAGTTACAACCTTTTGTCTGGTCCAATCCCTTCCGAAATAGGCAACCTCAGAAAGCTTAATTTGCTTATGTTGCAAGGGAACAAGCTGAATTCTTCCATCCCTGGTTCACTCTCTTCATTGGAGTCTCTCAACCTTCTTGATCTCTCCAACAATCTTTTAACAGGGAGCATTCCTGAAAGCCTCTCTGTGCTGCTACCAAACTCAATTAATTTCTCGCACAATATGCTTTCGGGTCCAATTCCTCCCAAATTGATCAAAGGAGGTTTGGTGGAAAGTTTTGCAGGAAATCCGGGTTTGTGTGTCTTACCGGTGTATGCTAATTCATCGGATCGAAACTTCCCTATATGTGCAAGTCCCTACAAGAGAAAGAGGATCAACACCATCTGGATAGCTGGGGTGTCAGTGGTTTTGATCTTTATTGGGTCTGCCTTGTTTCTCAAACGTCGGTGCAGTAAAGACACTGCTGCAGTGGAACATGAGGAGACACTGTCTTCTTCGTTCTTCTCTTATGATGTTAAGAGCTTCCACAAGATCTCTTTCGATCAAAAGGAGATCGTTGAGTCGTTGGTGGACAAGAATATAATGGGGCATGGAGGGTCTGGGACAGTGTACAAGATTGAATTGAAAAGTGGTGATATTGTCGCAGTGAAGAGGCTGTGGAGTCGGAAGTCCAAGGATTCGACTCCAGAGGATCGGTTGTTTGTGGACAAGGCATTGAAGGCAGAGGTGGAGACCTTAGGAAGCATAAGACACAAGAACATAGTGAAACTGTACTGCTGCTTCTCCAGTTTCGACTGTAGCTTGTTGGTTTATGAGTACATGCCAAATGGTAATCTTTGGGATTCCCTGCACAAGGGTTGGACCCTTTTGGATTGGCCTACTCGTTATAAAATTGCATTGGGGATTGCACAGGGTTTAGCATACCTCCACCATGATTTGCTTCTCCCTATTATCCATCGAGACATCAAGTCAACAAATATCCTGTTGGATGTTGATTACCAGCCCAGGGTTGCAGACTTTGGGATTGCCAAGGTTTTGCAAGCAAGAGGAGTGAAGGATTCCACAACAACTGTCATTGCAGGAACATATGGTTACTTAGCCCCAGAATTTGCATATTCATCAAGGGCCACCACCAAGTGCGACGTGTACAGTTTTGGGGTGATTTTGATGGAACTGTTAACTGGGAAGAAGCCCGTGGAGGCAGAGTTTGGAGAGAACAGAAATATTGTTTTCTGGGTTTCCAACAAAGTAGAAGGCAAGGAAGGGGCAAGACCAAGCGAGGTGTTTGACCCGAGGTTATCATGTTCATTCAAGGATGACATGATCAAAGTGTTGCGGGTGGCCATTCGCTGCACCTACAAAGCCCCAACAAGTAGACCGACCATGAAAGAGGTTGTTCGGCTTCTGATTGAGGCAGAGCCACGCGGTTCCGATTCTTGCAAGTTGTCGACCAAAGATGTATCAAATGTCACCGTAGTAAAGAAACCAAGTGAGTTATAA 2901 0.4619 MNHHPFITLLSTILIVCTTTVSLSQVINTSSSTKNQSQFFSLMKMSLSGKYPMDWDAGKSVCGFTGVTCNTKGEVISLDLSGWSSLSGKFPSDTCSYLPELRVLRLGHARFKFNVDTILNCSHLEELNMNHMFQTGTLPDFSSLKSLRILDLSYNVFTGQFPMSVFNLINLEVLNFNENGGFNLWQLPADIDRLKNLKSMVLTTCMVHGQIPASIGNITSLVDLELSGNFLTGQIPKELGQLKNLQQLELYYNYHLVGNIPEELGNLTELVDLDMSVNKFTGSIPASVCRLPKLQVLQLYNNSLTGEIPGAIENSTALRMLSLYDNFLVGQVPKKLGQYSGMLVLDLSENKFSGPLPTEVCKGGTLEYFLVLDNMFSGEIPQSYANCMRLLRFRVSNNRLEGSIPAGLLGLPHVSIIDLSNNNLTGPIPEINGNSRNLSELFLQRNKISGVITPTISRAISLVKIDFSYNLLSGPIPSEIGNLRKLNLLMLQGNKLNSSIPGSLSSLESLNLLDLSNNLLTGSIPESLSVLLPNSINFSHNMLSGPIPPKLIKGGLVESFAGNPGLCVLPVYANSSDRNFPICASPYKRKRINTIWIAGVSVVLIFIGSALFLKRRCSKDTAAVEHEETLSSSFFSYDVKSFHKISFDQKEIVESLVDKNIMGHGGSGTVYKIELKSGDIVAVKRLWSRKSKDSTPEDRLFVDKALKAEVETLGSIRHKNIVKLYCCFSSFDCSLLVYEYMPNGNLWDSLHKGWTLLDWPTRYKIALGIAQGLAYLHHDLLLPIIHRDIKSTNILLDVDYQPRVADFGIAKVLQARGVKDSTTTVIAGTYGYLAPEFAYSSRATTKCDVYSFGVILMELLTGKKPVEAEFGENRNIVFWVSNKVEGKEGARPSEVFDPRLSCSFKDDMIKVLRVAIRCTYKAPTSRPTMKEVVRLLIEAEPRGSDSCKLSTKDVSNVTVVKKPSEL 966
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01017 966 FunFam receptor protein-tyrosine kinase CEPR1 639 740 - -
Spst9g01017 966 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 19 218 - -
Spst9g01017 966 Gene3D Ribonuclease Inhibitor 183 287 IPR032675 -
Spst9g01017 966 ProSiteProfiles Protein kinase domain profile. 656 943 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g01017 966 ProSitePatterns Serine/Threonine protein kinases active-site signature. 784 796 IPR008271 GO:0004672|GO:0006468
Spst9g01017 966 SUPERFAMILY Protein kinase-like (PK-like) 643 936 IPR011009 -
Spst9g01017 966 Gene3D Ribonuclease Inhibitor 29 182 IPR032675 -
Spst9g01017 966 Gene3D Ribonuclease Inhibitor 292 577 IPR032675 -
Spst9g01017 966 Gene3D Phosphorylase Kinase; domain 1 639 740 - -
Spst9g01017 966 FunFam Receptor protein-tyrosine kinase CEPR1 291 577 - -
Spst9g01017 966 SMART serkin_6 656 943 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g01017 966 Pfam Protein kinase domain 658 933 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g01017 966 SMART LRR_typ_2 507 531 IPR003591 -
Spst9g01017 966 SMART LRR_typ_2 483 506 IPR003591 -
Spst9g01017 966 SMART LRR_typ_2 411 434 IPR003591 -
Spst9g01017 966 SMART LRR_typ_2 168 194 IPR003591 -
Spst9g01017 966 SMART LRR_typ_2 98 121 IPR003591 -
Spst9g01017 966 SMART LRR_typ_2 218 242 IPR003591 -
Spst9g01017 966 SMART LRR_typ_2 291 315 IPR003591 -
Spst9g01017 966 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 741 954 - -
Spst9g01017 966 Gene3D Transferase(Phosphotransferase) domain 1 741 960 - -
Spst9g01017 966 FunFam Leucine-rich repeat receptor-like protein kinase 184 287 - -
Spst9g01017 966 SUPERFAMILY L domain-like 55 254 - -
Spst9g01017 966 SUPERFAMILY L domain-like 187 571 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01017 Spst-Chr9 9089965 9093402 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01017 32 943 Receptor kinase-like Gene Family AT5G49660 65.288 0.0 1216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Spst9g01017 Pkinase 3.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01017 - - gmx:100785822 1717.98