Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00995 ATGTCCAAATTACCCCTCTTCGTTGCCTTTCATTTGCTTCTCTTAATCAACGTCGCTGTACCCTCTCAGGTAATTTCAGAAACCGAACAAACAATCCTACTCACACTCAAACGTGAACTGGGGGACCCACCGTCGCTCCGATCATGGAAACCGTCGCCATCGGCGCCGTGCGACTGGACTGGGATTAGCTGCAGCGGCGGCGCCGTCACGAAGCTTCTCCTCTCCAGTAAAAACATCACCACCACCAAGAACCTCCCTTCCACAATCTGCAACCTCAAACACCTCATCATGCTTGACCTTTTCAACAACTCCATCGCCGGCGAGTTTCCGACAACCTTGTACGCCTGCTCCAACCTCCGGAACCTTAACCTGTCGCAGAACTGCCTCGCTGGTGTCATCCCCACTGACGTGGACCGCCTCAAAACCCTCACTGACCTCCGCCTCAGCGCCAACTCCTTCTCCGGCGACATCCCGGCGGCGATAGGGAACCTGCGGGAACTGCAAACGCTGCATCTTTTCCAAAACAACTTCAACGGAACTGTCGCCAAGGAAATTGGAAACTTGTCCAACCTCGAGTTCTTGGGTTTGGCTTATAATCTAAAGCTCGCGCCGTGGAAAATCCCGTTGGAGTTTAGGGGATTAAGAAATTTGAGGCAGATGTATATGCCGCAGTGTAACTTGATCGGAGAGATTCCGGAATATTTCGGGAATATTTTCACGAATCTCGAACGGTTGGATTTGGCGATGAACAATTTATCAGGGAGCATTCCTAGGAGTTTGTTCTCGTTGAGGAAGTTGAATTTCTTGTACCTGTACAGTAACAGGTTGTCGGGTGTGATTCCTAGTGCTTCGATGCAGGGTTTGGAACTAATCGACGTTGATTTCGCTAAAAATAATTTGACAGGTTTCATACCCCAAGAGTTTGGACAGTTAAAGAACTTGAATACCTTGCACTTGTACGAGAATCACCTGTGCGGTGAAATTCCCAGAAGTTTAAGCCTAATTCCTAGTCTTGAGTATTTCAGAGTTTTCAAAAATAACTTGAGTGGAACTCTGCCTCCAGAACTAGGCTTGCATTCCAAGCTTAGAATGTTTGAGGTTTCTGACAACCAACTCAGTGGTGGGTTGCCAGAACATTTGTGTGCAGGTGGTGCCCTAATCGGTGTGATTGTTTTTTCCAATAATTTTAGTGGGGTTTTGCCTGAGTGGATTGGGAATTGTCCTTCTCTCGACACGGTTCAGGTTTATAATAACAAATTTTCGGGGGAGGTTCCTTTGGGTTTGTGGACTACGAGTAACCTTTCGTCCTTGATTTTGAGCAACAACTCCTTTTCTGGGCCTCTTCCTAGTAAATTGTTTTGGAATTTAACGAGGCTGGAGATCGCCAACAACAACTTCTCGGGTGGGATATCTGTTGGGATTACTGCAGCCAAAAATCTGCTATTTCTTGATGCGAGAAACAACATGCTTTCAGGTGAAATTCCAAGGAAACTGACGCAACTTTCTGGGCTTAGTACTCTCATGCTGGATGGTAACCAACTTTCGGGTGCACTTCCGTCAGAGATTATTTCGTGGCAATCACTGAACACGCTGACACTATCACGAAACAAGCTTTCTGGCCAGATTCCCCCAGCTATTACTGCTCTTCCCCGCCTGACTTACCTGGACTTGTCTCAAAATGGCATATCGGGTGCAATCCCTCCCAAGTTCGATAGGTTGAAGTTTGTTTTCCTCAACTTGTCCTCCAACCAGCTATCTGGGAAAATCCCTGATGAGTTCAATAACCTCGCGTTTGAAAACAGTTTCTTGAACAATCCTCATCTATGTGCTTACAATCCAAACGTCCAACTTGCTAACTGCTTGACGAAAACCGCGTCAGCGGCACCACAGTCGAGCAATTCGTCTTCGAAATCACTGGCCCTGATTCTGGCTGCCACCACCGTTGTGCTGCTCGCCATAGCTTCCTTGGTCTTCTATACGTTGAAAACGCAATGGGGCAAAAAGCACTGCGGGCATAATAATAAGGTTGCAACGTGGAGGCTCACTTCATTTCAGAGGCTTGACCTCACCGAAATAAACTTCCTCTCAAGTTTGACAGATAATAACCTTATAGGAAGTGGAGGGTTTGGTAAAGTTTATCGGATTGCTTCAAATCGTCCAGGTGAGTATGTTGCCGTGAAGAAGATCTGGAATTGCAAAGATGTGGATGACAAGTTGGAGAAAGAGTTCCAGGCTGAGGTTGAGATTCTGGGCAATATTCGGCACTCGAATATAGTGAAGCTTTTGTGCTGCTATTCCAGTGAGAATTCCAAACTTCTAGTTTATGAATACATGGAAAATCAGAGCCTGGACAAATGGCTTCATGCAGAGAAGAAAACATCGCCTACTGGGTTGAGCTGGCCAACGAGGTTGAATATTGCCATTGGGGCTGCACAAGGTCTGTGTTATATGCACCATGAATGCTCACCCCCCGTCATCCACCGCGATGTCAAATCTAGCAATATACTGTTGGACTCAGAGTTCAGAGCTAAAATAGCAGATTTTGGGCTCGCCAAGATGTTGGCAAAGCCCGGGGAACTACACACCATGTCTACTCTAGCAGGCTCTTTTGGCTACATTCCACCAGAATACGCGTATTCAACTAAGATTAACGAGAAAGTTGATGCTTATAGCTTTGGCGTTGTGCTTTTAGAGCTTGTGACGGGAAGAAAGCCCAATTTAGGAGGCGAGAATGCATACAGCCTAGTTGAATGGGCGTGGGAGCATTTTACTAAAGGGAAGAACCTTACTGATGCATTCGATGAGGATGTCAAAGAACAACGTTATGCAGAAGAGATGACTAATGTCTTCAAATTGGGCCTCCTTTGCACAAGCTCCTTACCCTCAACTAGGCCTTCCACGAAGGAGATTTTGCAAGTTCTTCGTAGGTGTTGTCATTCAGGTTCTACACGTAGAAGAGTGGGAAATGAGTTTGATATCGCTCCTCTTCTTAGTGACACAAGGTACGTTTGTAGTTACAAGGAGAGTAATGCTGACCCGTCCTGGTGA 3048 0.4642 MSKLPLFVAFHLLLLINVAVPSQVISETEQTILLTLKRELGDPPSLRSWKPSPSAPCDWTGISCSGGAVTKLLLSSKNITTTKNLPSTICNLKHLIMLDLFNNSIAGEFPTTLYACSNLRNLNLSQNCLAGVIPTDVDRLKTLTDLRLSANSFSGDIPAAIGNLRELQTLHLFQNNFNGTVAKEIGNLSNLEFLGLAYNLKLAPWKIPLEFRGLRNLRQMYMPQCNLIGEIPEYFGNIFTNLERLDLAMNNLSGSIPRSLFSLRKLNFLYLYSNRLSGVIPSASMQGLELIDVDFAKNNLTGFIPQEFGQLKNLNTLHLYENHLCGEIPRSLSLIPSLEYFRVFKNNLSGTLPPELGLHSKLRMFEVSDNQLSGGLPEHLCAGGALIGVIVFSNNFSGVLPEWIGNCPSLDTVQVYNNKFSGEVPLGLWTTSNLSSLILSNNSFSGPLPSKLFWNLTRLEIANNNFSGGISVGITAAKNLLFLDARNNMLSGEIPRKLTQLSGLSTLMLDGNQLSGALPSEIISWQSLNTLTLSRNKLSGQIPPAITALPRLTYLDLSQNGISGAIPPKFDRLKFVFLNLSSNQLSGKIPDEFNNLAFENSFLNNPHLCAYNPNVQLANCLTKTASAAPQSSNSSSKSLALILAATTVVLLAIASLVFYTLKTQWGKKHCGHNNKVATWRLTSFQRLDLTEINFLSSLTDNNLIGSGGFGKVYRIASNRPGEYVAVKKIWNCKDVDDKLEKEFQAEVEILGNIRHSNIVKLLCCYSSENSKLLVYEYMENQSLDKWLHAEKKTSPTGLSWPTRLNIAIGAAQGLCYMHHECSPPVIHRDVKSSNILLDSEFRAKIADFGLAKMLAKPGELHTMSTLAGSFGYIPPEYAYSTKINEKVDAYSFGVVLLELVTGRKPNLGGENAYSLVEWAWEHFTKGKNLTDAFDEDVKEQRYAEEMTNVFKLGLLCTSSLPSTRPSTKEILQVLRRCCHSGSTRRRVGNEFDIAPLLSDTRYVCSYKESNADPSW 1015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00995 1015 ProSitePatterns Protein kinases ATP-binding region signature. 704 728 IPR017441 GO:0005524
Spst9g00995 1015 Pfam Protein kinase domain 700 972 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g00995 1015 FunFam Receptor-like protein kinase HSL1 isoform A 26 179 - -
Spst9g00995 1015 FunFam Kinase family with leucine-rich repeat domain-containing protein 778 990 - -
Spst9g00995 1015 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 384 624 - -
Spst9g00995 1015 Gene3D Transferase(Phosphotransferase) domain 1 778 992 - -
Spst9g00995 1015 CDD STKc_IRAK 704 974 - -
Spst9g00995 1015 SMART LRR_typ_2 239 263 IPR003591 -
Spst9g00995 1015 SMART LRR_typ_2 92 116 IPR003591 -
Spst9g00995 1015 SMART LRR_typ_2 311 335 IPR003591 -
Spst9g00995 1015 SMART LRR_typ_2 431 455 IPR003591 -
Spst9g00995 1015 SMART LRR_typ_2 164 188 IPR003591 -
Spst9g00995 1015 SMART LRR_typ_2 501 525 IPR003591 -
Spst9g00995 1015 SMART LRR_typ_2 549 572 IPR003591 -
Spst9g00995 1015 SUPERFAMILY L domain-like 290 598 - -
Spst9g00995 1015 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 207 969 - -
Spst9g00995 1015 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 182 280 - -
Spst9g00995 1015 SUPERFAMILY L domain-like 28 283 - -
Spst9g00995 1015 ProSitePatterns Serine/Threonine protein kinases active-site signature. 825 837 IPR008271 GO:0004672|GO:0006468
Spst9g00995 1015 Pfam Leucine Rich Repeat 118 154 IPR001611 GO:0005515
Spst9g00995 1015 FunFam Receptor-like protein kinase HSL1 678 777 - -
Spst9g00995 1015 Gene3D Ribonuclease Inhibitor 287 330 IPR032675 -
Spst9g00995 1015 Gene3D Ribonuclease Inhibitor 331 382 IPR032675 -
Spst9g00995 1015 SMART serkin_6 698 997 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g00995 1015 Pfam Leucine rich repeat N-terminal domain 29 65 IPR013210 -
Spst9g00995 1015 Gene3D Ribonuclease Inhibitor 25 180 IPR032675 -
Spst9g00995 1015 Gene3D Ribonuclease Inhibitor 181 286 IPR032675 -
Spst9g00995 1015 Gene3D Phosphorylase Kinase; domain 1 679 777 - -
Spst9g00995 1015 Gene3D Ribonuclease Inhibitor 385 627 IPR032675 -
Spst9g00995 1015 ProSiteProfiles Protein kinase domain profile. 698 982 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g00995 1015 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 282 380 - -
Spst9g00995 1015 SUPERFAMILY Protein kinase-like (PK-like) 692 974 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00995 Spst-Chr9 8877758 8880893 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00995 18 997 Receptor kinase-like Gene Family AT5G25930 52.685 0.0 976
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Spst9g00995 Pkinase 3.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00995 - - gmx:100782466 1562.74