Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00987 ATGCCTGAGTTGCGTATTAGAATACGCAGAAACAGCCTCGTAGACAACGCAAACGCGAACCAGGTCACTCAGCCAGCCTCGCCGGCGACCGTCGGAGCTGGACGGAGGAAGACATCTGCCGTGGCTGCCCCGACCCGGAGGAACCGGAGACAGAACAACGCGATCACAGCTGACTATAGAATCGTGAACGAGAACGCCGGTGCCGTTCGCGGAGCTAGAAATATAAATTTGAAAGAGCAGCTAGGGAAGAAAGAGAATAATAATAAGATTTCGGTTAGGGTTTTTGAAGAAGAAGACATGGATGAAGACGATAGCCGTGGCCGCAGCGCAGACAAGGCTGCGGGAGCTGAAGACGAAGGCACCACTGCTCCTCTTCCAGAGAAGGTTCAAGTTGGTGGCTCTCCGTTGTATAGAATTGAGAGAAAACTTGGGAAGGGAGGATTTGGGCAAGTCTATGTTGGTCGGCGGATAGGTGCTATGAGTTCTAGCGAGCGGACTGGTGCTGGTGCTGTTGAGGTAGCCTTAAAATTTGAGCATAGAAGCAGTAAGGGGTGCAATTATGGACCACCATATGAATGGCAGGTTTATAATGCATTAGGAGGTAGTCATGGTGTTCCACGAGTACATTTCAAGGGCCGGCAAGGTGACTACTATATTATGGTCATGGATATGCTTGGCCCCAGTCTGTGGGATGTTTGGAATAACAAATCACATACCATGTCTACTGAAATGGTTGCTTGTATTGCAATTGAGGCTATCTCCATATTAGAGAAGATGCATTCTAGAGGATATGTGCACGGTGATGTAAAACCTGAGAATTTTTTGCTTGGACCCCCTGGAACTCCAGATGAAAAAAAGTTGTTTCTGGTTGATCTTGGGTTAGCAACTCGGTGGCGTGATAGTTCGAATGGCCTTCACGTTGAATATGATCAACGTCCAGATGTTTTTAGGGGCACTGTTCGATATGCTAGCGTGCATGCTCATCTTGGTAGAACAGGTAGCAGGAGAGATGACTTGGAATCTCTTGCGTACACTCTTGTCTTCCTTCTCCGTGGTCGGCTTCCTTGGCAAGGATATCAGGGAGAAAATAAAGGGTTTCTTGTCTGCAAAAAAAAGATGGCCACTTCTCCAGAAACTTTATGTTACTTTTGCCCTCAACCTTTCCGGCAGTTTGTTGAATATGTAGTGAATTTGAAGTTTGATGAAGAACCAAATTATGCAAAATATATATCCCTGTTTGATGGAATTGTGGGCCCAAATCCAGATATCAGGCCAATAAACACAGAGGGTGCTCAGAAGCTTATATGTCAAGTAGGACATAAGAGGGGGAGATTGACTATGGAAGAGGATGATGATGAACAGCCAAAAAAGAAGGTTCGAATGGGAATGCCCGCTACACAATGGATTAGTGTTTACAATGCTCGTCGACCAATGAAGCAAAGGTACCATTATAATGTTGCTGATGTGCGGTTAGCCCAACACATTGATAAAGGGAATGAAGATGGTTTATTTATCAGCAGTGTGGCTTCTTGTTCTAATCTTTGGGCACTCATTATGGATGCTGGCACTGGTTTCACTGCACAAGTTTATGAGCTCTCCTCCTACTTTCTTCATAAGGAATGGATTATGGAACAGTGGGAAAATAATTATTACATTAGTGCTATAGCCGGAGCTCATAATGGATGCTCATTGGTTGTAATGTCTAAAGGTACCCAATACTTACAACAATCCTATAAAGTCAGTGATTCATTTCCTTTTAAGTGGATCAACAAAAAATGGAGAGAAGGATTTTATGTCACTGCTATGGCTACTGCTGGGACTAGATGGGCAATTGTTATGTCCCGTGGAACTGGTTATTCTGATCAGGTTGTGGAACTTGATTTCTTGTATCCCAGTGAAGGTATTCATCGAAGGTGGGATAATGGATATCGTATCACCTCAACTGCTGCAACATGGGACCAGGCTGCTTTTGTTCTTAGTGTCCCAAGAAGAAAACCGGCTGATGAAACTCAGGAGACACTCCGCACATCTGCTTTTCCTAGCACTCATGTTAAGGAAAAATGGGCAAAGAATCTCTATATTGCATCCATTTGTTATGGGAGAACAGTTAGGCTTTTGTTTATTGATGGTAATGATGACTTTGAAATTTATACTTCTATTATTCTAATGACTTCTTACTTCCGATTTCCAAAGAATTCGGGTTGTTTGGGTCGTATATTTAACTTCTGTGGCTATGGCAACGTGCGGGTTTTGGTTGGTCCTCGCAATGTTATGTTGCTGGAGCAACCTATATATCAACAAATCCGAAGCTGTTCAAGAAACTGA 2325 0.4387 MPELRIRIRRNSLVDNANANQVTQPASPATVGAGRRKTSAVAAPTRRNRRQNNAITADYRIVNENAGAVRGARNINLKEQLGKKENNNKISVRVFEEEDMDEDDSRGRSADKAAGAEDEGTTAPLPEKVQVGGSPLYRIERKLGKGGFGQVYVGRRIGAMSSSERTGAGAVEVALKFEHRSSKGCNYGPPYEWQVYNALGGSHGVPRVHFKGRQGDYYIMVMDMLGPSLWDVWNNKSHTMSTEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATRWRDSSNGLHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLVFLLRGRLPWQGYQGENKGFLVCKKKMATSPETLCYFCPQPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPINTEGAQKLICQVGHKRGRLTMEEDDDEQPKKKVRMGMPATQWISVYNARRPMKQRYHYNVADVRLAQHIDKGNEDGLFISSVASCSNLWALIMDAGTGFTAQVYELSSYFLHKEWIMEQWENNYYISAIAGAHNGCSLVVMSKGTQYLQQSYKVSDSFPFKWINKKWREGFYVTAMATAGTRWAIVMSRGTGYSDQVVELDFLYPSEGIHRRWDNGYRITSTAATWDQAAFVLSVPRRKPADETQETLRTSAFPSTHVKEKWAKNLYIASICYGRTVRLLFIDGNDDFEIYTSIILMTSYFRFPKNSGCLGRIFNFCGYGNVRVLVGPRNVMLLEQPIYQQIRSCSRN 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00987 774 ProSiteProfiles Protein kinase domain profile. 137 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g00987 774 Gene3D Transferase(Phosphotransferase) domain 1 102 460 - -
Spst9g00987 774 PANTHER CASEIN KINASE-RELATED 137 670 - -
Spst9g00987 774 SMART serkin_6 137 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g00987 774 MobiDBLite consensus disorder prediction 89 129 - -
Spst9g00987 774 Pfam Protein kinase domain 137 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g00987 774 ProSitePatterns Serine/Threonine protein kinases active-site signature. 264 276 IPR008271 GO:0004672|GO:0006468
Spst9g00987 774 FunFam casein kinase 1-like protein HD16 110 460 - -
Spst9g00987 774 CDD STKc_CK1 137 413 - -
Spst9g00987 774 MobiDBLite consensus disorder prediction 18 51 - -
Spst9g00987 774 ProSitePatterns Protein kinases ATP-binding region signature. 143 176 IPR017441 GO:0005524
Spst9g00987 774 SUPERFAMILY Protein kinase-like (PK-like) 137 417 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00987 Spst-Chr9 8756173 8761758 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00987 232 413 MAP Kinase Kinase Kinase AT5G50180 25.000 1.12e-08 55.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Spst9g00987 Pkinase 1.2e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00987 - - gmx:100779382 1266.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00987 9 8756173 8761758 Spst9g00987 9 8756173 8761758 ECH