Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00983 ATGGTGATTGCATCATCTTTCATGGTTAACGAGTCAACTGACTGGATTTTGAGGCAACCAGAGATACTAGCAGTTGCATATTCTGGAACTATTGCATCTGCTCTTAACTATGGAATCATTACATGGAGCAATAAGATCTTGGGGCCAGCTTTGGTTTCCCTTTATAATCCGCTTCAACCTGCATTTTCTGCCTTCCTGTCCCAAATTTTCCTTGGCACTCCAATTTACTTGGGAAGCATCCTAGGGGGATCTTTGATCGTTGCTGGTCTCTATATAGTTACTTGGGCATCCTATAGAGAGAAACAAAAAACTTTTGTAGTTACTCCTAATGGCTCTTGGATCTCTGAACCACTTATTCATGAAAAAGGTGAATATCAGAATTCAGGATCCTCCAATTCACTATCAAAGCCAAGCTCATCAAATGAATGGTTGAATGACAATGTGCCTGGCTTCGGAACTAAGCATTGCGGTTGGTTTTGGCATCACTGTTTCAACGATCGAACTAACCCAACAACCCCATTTGGTGTTTTAGAGGGTGTCGGAGTTGTTGTAGAGAGTGGATTCATTCCAATGGGAGCAGCTGGAGTTGGAGTGGGTGTGGGGGGTGACATATGGAAGGCCCATACGGCCATGGCGATGGTGCAGCTTTTCAATGGCATCTACCATGTCATCACCAAAGTGGCCCTTAATGTTGGCGTCAACCAATTAGTCTTCTGTGTCTTTCGCGATGCCATTGCTCTTTCAATCCTCGCACCCCTTGCTTATATTCGTGAAAAACGGATTCGACCACCCACTACTAAGAACCTCCTGGTTTCATTCTTCTTTCTTGGATTAACTGGGATATTTGGCAACCAGCTTTTGTTTCTTATTGGTTTAAGCTATACTAATCCATCTTATGCGGCTGCCATACAACCGGCCATTCCGGTCTTTACCTTTATGTTGGCTGTAATGATGGGTACAGAAAGAGTAAACCTAGCCAGATATGATGGTCTGGCAAAAGTTGGAGGAACCATCATCTGTGTTTCTGGTGCCATATTAATGGTTTTGTATCGTGGTCCAGCTTTGATAGGACATGCTCCAATCGATCATGGTACACAAAATGAAATAAGTGCCAAAGGACAGCCAGAGCCAACTGGATGGTTAATTGGTGCTTTACAAGCTATCGGGTTTGACCGTTTTCATCTTGGGGTTCTGTGCTTGATTGGGAACTGCATTTGTATGGCTGCGTTTCTAGCCATTCAGGCACCAGTATTAAAAAAATATCCAGCAAACATATCTGTCACAGCATATTCATACTTATTCGGAACTTTACTGATGGTCACGGTGTCATCATTCGTGAATACCGAGTCAAGTGACTGGAGTTTGGCATCATCAGAAGTACTTGCTGTTATTTATGCTGGAACTGTTGCATCTGCACTTAACTATGGACTCATTACATGGTGCAACAAAATCTTGGGGCCAGCCATGGTTTCCATTTACAATCCGCTTCAACCTGCGTTTTCAGCCATCCTGTCACAAATTTTCCTTGGAAGTCCAATTTACTTGGGAAGCATCATAGGAGGATCTTTTATCATTACTGGTCTATATTTGGTTACTTGGGCATCTTTTAAAGAAAAACAAGCAAATCTTGGAGGTGGAGTTGCTGCTCATGCCTCTTGGGTCTCTGAACCACTTGTTCACGACAGAAGTCCACTCCAGAAAGGTCACCCATTTTCGGGGTCCTCCACCGCTTCCCCAAAAGCATTATCAGATTAA 1755 0.4336 MVIASSFMVNESTDWILRQPEILAVAYSGTIASALNYGIITWSNKILGPALVSLYNPLQPAFSAFLSQIFLGTPIYLGSILGGSLIVAGLYIVTWASYREKQKTFVVTPNGSWISEPLIHEKGEYQNSGSSNSLSKPSSSNEWLNDNVPGFGTKHCGWFWHHCFNDRTNPTTPFGVLEGVGVVVESGFIPMGAAGVGVGVGGDIWKAHTAMAMVQLFNGIYHVITKVALNVGVNQLVFCVFRDAIALSILAPLAYIREKRIRPPTTKNLLVSFFFLGLTGIFGNQLLFLIGLSYTNPSYAAAIQPAIPVFTFMLAVMMGTERVNLARYDGLAKVGGTIICVSGAILMVLYRGPALIGHAPIDHGTQNEISAKGQPEPTGWLIGALQAIGFDRFHLGVLCLIGNCICMAAFLAIQAPVLKKYPANISVTAYSYLFGTLLMVTVSSFVNTESSDWSLASSEVLAVIYAGTVASALNYGLITWCNKILGPAMVSIYNPLQPAFSAILSQIFLGSPIYLGSIIGGSFIITGLYLVTWASFKEKQANLGGGVAAHASWVSEPLVHDRSPLQKGHPFSGSSTASPKALSD 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00983 584 SUPERFAMILY Multidrug resistance efflux transporter EmrE 243 349 - -
Spst9g00983 584 SUPERFAMILY Multidrug resistance efflux transporter EmrE 434 537 - -
Spst9g00983 584 MobiDBLite consensus disorder prediction 568 584 - -
Spst9g00983 584 MobiDBLite consensus disorder prediction 561 584 - -
Spst9g00983 584 SUPERFAMILY Multidrug resistance efflux transporter EmrE 15 99 - -
Spst9g00983 584 PANTHER WAT1-RELATED PROTEIN 3 101 IPR030184 GO:0016020|GO:0022857
Spst9g00983 584 Pfam EamA-like transporter family 395 532 IPR000620 GO:0016020
Spst9g00983 584 Pfam EamA-like transporter family 16 94 IPR000620 GO:0016020
Spst9g00983 584 Pfam EamA-like transporter family 212 348 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00983 Spst-Chr9 8721257 8730371 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00983 290 560 Nodulin-like Gene Family AT5G45370 62.637 3.69e-119 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00983 - - gmx:100787738 639.417