Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00977 ATGGCCAGAGGATCTTCGACGACTTCAAATACAAAATCCATGACATTTATATGCCTCTTCTTGTTCATGCTCAACTTCCACTTATCTCATGGAGAGCAACAACAGGTTGAGCTTTTGTTGTCATTCAAAGCTTCCATCTATGACCTGCTTCACTTTCTCTCAAACTGGGACACTTCCTCTGCCTCTCTATGCAAGTGGCATGGTATCACCTGCGACAAAAACGTTAACTCTTCCCACGTTAAAGCTGTGGTGCTCTCAGGAAAAAACATGACGGGCCAGGTTTCCTCCTCCATTTTTCAACTTCCATACGTAACAAACCTCGACCTTTCCAATAACCAGTTTGTTGGGGAAATCACTTTCAACTACTCTCTCAAATCTCTGTCTCCACTTCGTTACCTTAACCTCAGCAACAACAACCTCACCGGTCCTTTGCCTCAACCCTTGTTTTCCGTGCTTTTCTCAAACCTCGAAACTCTGGATCTCTCCAACAACATGTTTTCGGGGAACATACCTGACCAAATTGAATTGCTTTCCAGCCTTAGGTATCTTGATCTTGGAGGAAACGTTTTGGTAGGAAAGATTCCGAATTCCATCGCCAACATGACCACTTTGCAATACCTTACGTTGGCTTCAAACCAGTTAGTGGATAAGATACCACAAGAAATTGGCAAAATGAAGAGCTTGAAGTGGATTTACTTGGGCTACAACAACCTTTCAGGTGAGATACCAAGTAGCATTGGAGCGTTACTCTCTTTGAATCACCTCGACCTTGTTTACAACAACCTCACTGGACCTATTCCTCAATCTCTCGGACACCTCACCGAGCTTCAATACCTCTTTCTCTTCCAAAACAAACTAAGTGGTCCAATTCCCCGATCCATTTTCGAACTGAAAAAGCTCATTTCACTCGATCTAAGTGATAACTCTCTTTCGGGTGTGATTTCTGAGCGTGTGGTTCAGCTTCAGAGGCTGGAGATTCTCCACCTTTTCTCAAACAACTTCACTGGGAATATTCCAAAGGGTGTTGCATCTTTGCCTCGGCTTCAGGTTCTTCAGCTATGGTCAAATGGATTAATAGGTGAGATTCCTGAAGAGTTAGGGAAGCATAGCAACCTCACTGTGTTGGACCTCTCCACCAACAACCTTGCAGGGAAGATCCCAGATAACATATGCAACTCTGGTAGTCTTTTCAAGCTTATCCTCTTCTCCAACTATTTCGAAGGAGAAATCCCAAAGAGCTTAACCTCTTGCAGAAGCCTTCGCCGAGTGAGACTCCAAAACAACAAGTTCTCGGGGAAATTACCGTCGGAGTTAACCACACTGCCTCAGGTATACTTCTTGGATATCTCTGGAAACCAACTATCCGGAAGGATCGATGACAGAAAATGGGACATGCCGTTGCTTCAAATGCTCAGTTTGGCTAACAACAACTTCTCAGGAGAAATCCCAAACTCTTTCGGGACAGAAATTCTTGAGGACTTGGACTTATCAAACAACCACTTCTCAGGTTCTATTGGACTCGGTTTTGAAAGCTTATTAGAGCTCGTGGAATTGAAGCTCAGCTGTAACAAACTCTGGGGTAACATTCCAGAAGAAATTTGCTCGTGCAAGAAGCTTGTGGCCTTAGATTTGAGTCACAACCAGCTCATTGGTGAAATCCCGATGAAATTCTCCGAGATGCCGGTTCTCGGCCTGCTTGACCTGTCGGAAAACCAATTCTCCGGCGAGATTCCACAGGACTTGGGAAGCGCGGAGTCTCTTGTTCAGATCAACATTTCACACAACCATTTTCGTGGAAGTTTACCCTCCACCGGTGCTTTCCTCGCCATCAACGCTAGTGCAGTCACCGGCAACAACCTCTGTGACCGTGACGGTGATGCTTCAAGCGGCTTGCCACTGTGCAAAAGCAATAACCAGAACCCAACTTGGCTCTTCATCATGCTATGTTTTCTACTAGCGTTGGTTGCGTTCGCAGCAGCTTCTTTTCTCGTCTTTTACGTTCGTAGGAGAAAGAGCTTCTCGGAAGTGCGAAGAGTGGAAAACGAAGACGGAACCTGGGAAGTGCAGTTTTTTAATTCCAAAGTAGCTAGGTTGATGAGCGTAGATGATGTTTTGTCAGCGATTAAAGATGGAAAAGTTGTGTCCAAAGGAAGGAACTGGGTTTCTTACGAGGGAAAATGCACGGAGAACGACACGCAGTTCGTGGTGAAGGAAATCAGTGACTTGAATTCTCTTCCGATGAGTATGTGGGAAGAGACAGTAAAGTTTGGGAAGGTTCGTCACCCCAATATTGTTAACCTTATTGGCACGTGTAGGTGTGGGAAGAGAGGGTACTTGGTGTACGAGCATGAGGAGGGGAAGAAACTTAGCGAAATTGTGAACAGTTTGAGTTGGCAAAGGCGTTGCAAAATTGCTGTTAGCGTTGCAAAAGCGCTTCATATCTTGCATTCTCGCGCTTCATCCATGGTTTTGGCCGGAGAGGTTTCACCAGAGATAGTTTGGGTCGACAGCAAAGGTGTCCCTCGTCTTAAGGTCACCCCTCCCATAATGCCATGTTTGGATGTCAAGGGTTTCATTTCTTCGCCCTACGTTCCTCAAGAGGCAAAAGAGGGGGGAAATGTGACGGAGAAGAGTGAGATATATGGGTTGGGAGTTATGCTGATTGAACTACTGACGGGAAGGAGCGCCATGGACATAGAAGCAGGCAATGGCATGCATAAGACTATTGTTGAGTGGGCCAGTTATTGTTACTCTGATTGTCATCTTGATACGTGGATTGATCCTGCGATGAAAGGTGGAGATGCATTGAGCTATCAGAACGACATGGTTGAGATGATGAATCTGGCACTGCACTGTACCGCAACTGATCCCACCGCGAGGCCATGCGCAAGAGACGTACTCAAAGCCCTAGAGAGTGTTCACAGAACCACTTTTTGTTGA 2940 0.4571 MARGSSTTSNTKSMTFICLFLFMLNFHLSHGEQQQVELLLSFKASIYDLLHFLSNWDTSSASLCKWHGITCDKNVNSSHVKAVVLSGKNMTGQVSSSIFQLPYVTNLDLSNNQFVGEITFNYSLKSLSPLRYLNLSNNNLTGPLPQPLFSVLFSNLETLDLSNNMFSGNIPDQIELLSSLRYLDLGGNVLVGKIPNSIANMTTLQYLTLASNQLVDKIPQEIGKMKSLKWIYLGYNNLSGEIPSSIGALLSLNHLDLVYNNLTGPIPQSLGHLTELQYLFLFQNKLSGPIPRSIFELKKLISLDLSDNSLSGVISERVVQLQRLEILHLFSNNFTGNIPKGVASLPRLQVLQLWSNGLIGEIPEELGKHSNLTVLDLSTNNLAGKIPDNICNSGSLFKLILFSNYFEGEIPKSLTSCRSLRRVRLQNNKFSGKLPSELTTLPQVYFLDISGNQLSGRIDDRKWDMPLLQMLSLANNNFSGEIPNSFGTEILEDLDLSNNHFSGSIGLGFESLLELVELKLSCNKLWGNIPEEICSCKKLVALDLSHNQLIGEIPMKFSEMPVLGLLDLSENQFSGEIPQDLGSAESLVQINISHNHFRGSLPSTGAFLAINASAVTGNNLCDRDGDASSGLPLCKSNNQNPTWLFIMLCFLLALVAFAAASFLVFYVRRRKSFSEVRRVENEDGTWEVQFFNSKVARLMSVDDVLSAIKDGKVVSKGRNWVSYEGKCTENDTQFVVKEISDLNSLPMSMWEETVKFGKVRHPNIVNLIGTCRCGKRGYLVYEHEEGKKLSEIVNSLSWQRRCKIAVSVAKALHILHSRASSMVLAGEVSPEIVWVDSKGVPRLKVTPPIMPCLDVKGFISSPYVPQEAKEGGNVTEKSEIYGLGVMLIELLTGRSAMDIEAGNGMHKTIVEWASYCYSDCHLDTWIDPAMKGGDALSYQNDMVEMMNLALHCTATDPTARPCARDVLKALESVHRTTFC 979
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00977 979 Gene3D Ribonuclease Inhibitor 297 629 IPR032675 -
Spst9g00977 979 ProSiteProfiles Protein kinase domain profile. 662 977 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g00977 979 SMART serkin_6 708 977 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g00977 979 Pfam Leucine rich repeat N-terminal domain 33 72 IPR013210 -
Spst9g00977 979 Pfam Protein kinase domain 716 968 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g00977 979 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase 330 630 - -
Spst9g00977 979 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase 672 783 - -
Spst9g00977 979 SUPERFAMILY L domain-like 320 628 - -
Spst9g00977 979 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase 784 979 - -
Spst9g00977 979 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase 34 151 - -
Spst9g00977 979 Gene3D Transferase(Phosphotransferase) domain 1 785 977 - -
Spst9g00977 979 FunFam Leucine-rich repeat receptor protein kinase EMS1 244 329 - -
Spst9g00977 979 ProSiteProfiles Leucine-rich repeat profile. 155 177 IPR001611 GO:0005515
Spst9g00977 979 PANTHER UNNAMED PRODUCT 123 898 - -
Spst9g00977 979 Pfam Leucine Rich Repeat 130 147 IPR001611 GO:0005515
Spst9g00977 979 SMART LRR_typ_2 370 393 IPR003591 -
Spst9g00977 979 SMART LRR_typ_2 127 151 IPR003591 -
Spst9g00977 979 SMART LRR_typ_2 225 249 IPR003591 -
Spst9g00977 979 SMART LRR_typ_2 273 297 IPR003591 -
Spst9g00977 979 SMART LRR_typ_2 560 584 IPR003591 -
Spst9g00977 979 SMART LRR_typ_2 465 488 IPR003591 -
Spst9g00977 979 SMART LRR_typ_2 177 201 IPR003591 -
Spst9g00977 979 SMART LRR_typ_2 153 176 IPR003591 -
Spst9g00977 979 SMART LRR_typ_2 512 536 IPR003591 -
Spst9g00977 979 SMART LRR_typ_2 345 369 IPR003591 -
Spst9g00977 979 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase 152 243 - -
Spst9g00977 979 SUPERFAMILY Protein kinase-like (PK-like) 709 974 IPR011009 -
Spst9g00977 979 Gene3D Ribonuclease Inhibitor 193 294 IPR032675 -
Spst9g00977 979 Gene3D Ribonuclease Inhibitor 32 192 IPR032675 -
Spst9g00977 979 SUPERFAMILY L domain-like 46 363 - -
Spst9g00977 979 Gene3D Phosphorylase Kinase; domain 1 671 783 - -
Spst9g00977 979 Pfam Leucine rich repeat 154 214 IPR001611 GO:0005515
Spst9g00977 979 Pfam Leucine rich repeat 227 286 IPR001611 GO:0005515
Spst9g00977 979 Pfam Leucine rich repeat 491 549 IPR001611 GO:0005515
Spst9g00977 979 Pfam Leucine rich repeat 346 405 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00977 Spst-Chr9 8672260 8675446 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00977 19 971 Receptor kinase-like Gene Family AT2G25790 51.817 0.0 897
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Singleton Spst9g00977 Pkinase 3.2e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00977 - - gmx:100777118 1685.62