Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00952 ATGGAGAGGATCATCGGCGGCAAGTTTAAGATTGGTCGGAAAATCGGAAGCGGTTCATTTGGACAAATTTATATTGCCTCAAATATCGACACCTCGGAGATTGTTGCGATCAAGATGGAAAGCAAGAAGACCAAACATCCACAACTATTGTATGAAGCAAAGTTATATAGTATTCTTCAAGGAGATAGTGGTGTTCCGAGTCTGAAGTGGTGCGGTACTGATGGAGACAATAATGTTCTAGTTATTGATCTTCTGGGACGGAGTCTTGAAGACTTGTTTGTCTATTGTGGGAGGAAGTTTTCATTAAAAACAGTTTTAATGTTGGCCGATCAGATGCTGACAAGAATAGAGTACCTGCATTCCAAGGGATTTTTGCATAGAGACATCAAACCAGATAACTTCCTTATGGGTCTTGGGAAGAAATCAAATCAGGTTTATATTATTGATTTCGGACTAGCAAAAAGATACAGGGATCCAAACACAAACAAGCATATTCCTTACAGATCTAGCAGTGTCCTATGTTATAAGATGCTCTGCAAGTCGTATCCTGTGGAGTTTGCTACATACTTTCATTATTGCCAATCCTTGACATTTGATCAACACCCAGATTATGGATACTTGAAGCGCCTGTTTCGTGATTTGTTCAAACAAAATGGTATTGGCTGTTTGTTTTATCGTATTTTTGAAAATGACAATTCTCATATTCGTTGA 711 0.384 MERIIGGKFKIGRKIGSGSFGQIYIASNIDTSEIVAIKMESKKTKHPQLLYEAKLYSILQGDSGVPSLKWCGTDGDNNVLVIDLLGRSLEDLFVYCGRKFSLKTVLMLADQMLTRIEYLHSKGFLHRDIKPDNFLMGLGKKSNQVYIIDFGLAKRYRDPNTNKHIPYRSSSVLCYKMLCKSYPVEFATYFHYCQSLTFDQHPDYGYLKRLFRDLFKQNGIGCLFYRIFENDNSHIR 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00952 236 PANTHER CASEIN KINASE-RELATED 176 218 - -
Spst9g00952 236 Gene3D Transferase(Phosphotransferase) domain 1 174 222 - -
Spst9g00952 236 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Spst9g00952 236 SMART serkin_6 9 228 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g00952 236 ProSiteProfiles Protein kinase domain profile. 9 236 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g00952 236 Gene3D Transferase(Phosphotransferase) domain 1 86 173 - -
Spst9g00952 236 SUPERFAMILY Protein kinase-like (PK-like) 4 220 IPR011009 -
Spst9g00952 236 Gene3D Phosphorylase Kinase; domain 1 1 85 - -
Spst9g00952 236 Pfam Protein kinase domain 10 162 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g00952 236 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00952 Spst-Chr9 8441191 8445694 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00952 5 153 EF-hand Containing Proteins AT1G74740 30.968 4.98e-14 68.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Spst9g00952 Pkinase 8e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00952 K08960 - csat:104733244 334.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00952 9 8441191 8445694 Spst8g01792 8 21588994 21593390 PCT