Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00943 ATGAAATTAAAGAAAGCTGTACAAAAAATCACACTTGTCCAGAACCCTCCACCCACCCCACGTTTTGTAAGGATTAAGGAAGAGGAGAAGGCAAAAACACTCCATGAACTCCTTGACCATTTGCAATTTTTCGGAAACGCAACTCGAAACAGAGAGTCGTTCAGAGTGACACTGTTGCCAACTGCACCGCTCTTAGGCGAGATCGGTTTCTGGTCACTGATAACAAAAGATGGAACAGAGCGAAATGACTTCGGATTCCGCTCCGCGGATATTGGCAAGGCAATTGGATTTCACTGCCGCTTATGGAGATCCGCCGCACCAGAAACCGCCGCCTCCGTCATCACCGCCGCATTCGCTTCTGCCGCCTGCGTTGCAATTGCAGTTAAATTTGCGGCCACCGGGGCAACGGCCGTGGTTATATTCAGAGCTGCTGGAGCAACAGCCGGCTCGTCGAATTCCGCAGCCCGTGCAGAAACTTCCGGTGAAGGTGTTGCCAGTGCTGGGATCTACTGTGATGGCTGCAACTGTGTAAATTGTCATAACAATGTGGATAATGAGGCAGCCAGACAGGAGGCAGTTGGAATTACATTGGAACGCAACCCAAATGCTTTCAGACCAAAAATTGCTAGCAGTCCACAAGAACCACGAAATTCCAAGGAAACTGAAATTCAAGTAATAGGAAAACACAATAAAGGATGTCACTGCAAGAAATCAGGTTGCCTAAAGAAGTACTGTGAGTGCTTCCAAGCCAATATCCTCTGCTCTGAAAATTGTAAATGCATGGACTGCAAGAATTTTGAAGAAAGTACTGAAAGAAGAGCAATTTTTCAGAGAGATTATAATCTAGATCACATCAAACAGCCAACTAATGCTGCTATTACTGAAGTTGTTGGATCATCTGGCTATCGAACCCGTATAACACCCAGGAAGAGAAAAATTCAAGAAATGTTTCCTAGAAAGTCAGCCGCGGATCAAATTGTTAACGTGACTGCCCAATACCTACAGGAAATTGATCGTATGGCTTCATCACCTCCGTCTCTGTCAGAATCATTTGTTTCTGAACATGCCAACGCAAGAATTTCTGGGTCTTCAAGATCTACGTACCGGTCGGTATTGGCAGATGTCCTCCAGCCACAAAATGTGACGAATCTCTGTTCACTTTTTGTAATTCTCTCACGAGTAGCTCTAAATACAAATGCAGAAACGAGAGGGAACACGAAAACTGGGAACTTAAAAGCTTCCGCTGCTTCATCAGCTAAATCGCTACGAGAAACTAAAGATGTCCGTCAGCCTGTTTGTGATGATCACGTGAATAAAGCTGAGGCAGATGCAGTTGATATCGCCGATTATAATAGGCCAATGTCGCCAGAAACGCTGGCATTGATGTGTGATGAACAGGACAATATGCTTTTTGGAAATAGGTCTGCAAATGAAGCTGCGTATCAAAACACGATTCAAAAGTCATTTAATTTTGATGCAAGAAGCACTGTTGTTTACGGGGAGCAGGAAAGGATTATAATGACCAATTTCTTGGATGTTCTTCGCGAACTCGTTACATTTGGTAGCATAAAAGGTTAG 1578 0.4436 MKLKKAVQKITLVQNPPPTPRFVRIKEEEKAKTLHELLDHLQFFGNATRNRESFRVTLLPTAPLLGEIGFWSLITKDGTERNDFGFRSADIGKAIGFHCRLWRSAAPETAASVITAAFASAACVAIAVKFAATGATAVVIFRAAGATAGSSNSAARAETSGEGVASAGIYCDGCNCVNCHNNVDNEAARQEAVGITLERNPNAFRPKIASSPQEPRNSKETEIQVIGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEESTERRAIFQRDYNLDHIKQPTNAAITEVVGSSGYRTRITPRKRKIQEMFPRKSAADQIVNVTAQYLQEIDRMASSPPSLSESFVSEHANARISGSSRSTYRSVLADVLQPQNVTNLCSLFVILSRVALNTNAETRGNTKTGNLKASAASSAKSLRETKDVRQPVCDDHVNKAEADAVDIADYNRPMSPETLALMCDEQDNMLFGNRSANEAAYQNTIQKSFNFDARSTVVYGEQERIIMTNFLDVLRELVTFGSIKG 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00943 525 PANTHER TESMIN/TSO1-RELATED 166 518 IPR028307 -
Spst9g00943 525 SMART CXC_2 228 269 IPR033467 -
Spst9g00943 525 ProSiteProfiles CRC domain profile. 151 268 IPR005172 -
Spst9g00943 525 MobiDBLite consensus disorder prediction 402 421 - -
Spst9g00943 525 MobiDBLite consensus disorder prediction 402 427 - -
Spst9g00943 525 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 231 265 IPR005172 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00943 Spst-Chr9 8329109 8340230 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00943 166 524 CPP Transcription Factor Family AT4G29000 45.789 4.24e-92 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Spst9g00943 TCR 2.7e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00943 - K21776 gmx:100811459 540.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00943 9 8329109 8340230 Spst9g00943 9 8329109 8340230 ECH