Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00935 ATGGAAGGTGAAAGGACAATCCCTGCTGTAGATGGGGTGACAGATGGTGTTCAGAAAATTAGAGCTCTGCACGGGAGGACTACTGGCCCTACAAGGCGCTCTACGAAAGGACAATGGACACCTGAAGAGGACGAGATTTTGCGGAAGGCTGTTCAGCGTTTCAAAGGAAAGAACTGGAAAAAAATAGCGGAGGGTTTCAAGGATAGAACTGATGTACAATGCTTGCATAGGTGGCAGAAAGTCTTGAATCCAGAACTTGTCAAAGGTCCATGGTCTAAGGAGGAGGATGAAATAATTATTGATATGGTGAATCGATATGGGCCTAAGAAGTGGTCTACTATCGCACAAAAGTTACCTGGACGTATTGGTAAACAATGTCGAGAAAGGTGGCATAATCATCTTAATCCTACCATAAATAAGGAAGCATGGACGCAGGAAGAGGAGTTGGCTCTCATACGTGCGCATCAGATTTATGGGAACAAGTGGGCAGAATTGGCGAAGATATTGCCTGGAAGGACAGACAATGCTATAAAAAACCATTGGAACAGTTCCGTAAAAAAGAAATTGGATTCTTACTTGGCATCAGGCTTGCTTACTCCATCACAAAATTTACCACTTGCTGGAAATCCGAATCAACCTATTGCTTCAATCGCTTCGAGGTTGCAGCAGAGTGGAGAAGATAATGGTCCTAGGGGGGGGACTGAAGGAGAGGAAGTTTCACAGTGTAGCCAGGAGTCAGCTAATGCTGGTTACTTTTCATCAGCCAGAGAGATGAACAGTGTTGCTTTACAATCTGGAGAGGAATACAGGCCAAATGAAGAACTGAGTCAAGCATCCTGTTCAGAGCCATATTACGTGTCTCTGGATGAAGTAACTGCATCCCTTACAGACATGGCTGGCCAAGAGATTTGCACTTCTCAATTCGTTGAGCAGAAATATTCCCACAAACCTAGAAATTCCAATGACGGGGAAGACCAGCTTGATTTAGATGACTTGACCAATATATCCTCACTGGACTTTGGGCATGAATCATCACAGTTTCAAAATGATTGCATGATGAATGTTCCGTTTCAGACTTCGGTGGGGTTAGGTGTTGCAACAACTATGCGACCCACATCTATGGACCCTGTTAAACCCGAACAAATGTTTATGTCTGACGATGAATGTTGCAGAATCCTATTTTCAGAAGCAATAAGCGAAGAATGCTTTTCTTCTGAAGATTTTAATAAAGGTGTAAATATGGTTGACTTGTTAGGAGGCCCGTCATTTCTTTCTCTGTCATCATTACCGTCTGCCCCCTCAGCTGTTTCATCTACTGGAGATAGGTTGATGTATACGGCCGAAGCTAACCGGTTGGTTGGTTCTGACGATGAGCAATTTGTCTCCAGAACGCAGGATAACATAATTTATGCCAGTGACTTGTCCAGTCCTTGTCTCAATAGGATAGACAGCACTGAAATGCAAGAACCATCAGATGTTGTCAAAGACGATTCAAAATTAGTCCCTGTAAATAGTTTCGGTTGTGGATCAGATGCAAAGCAAACTTCATATCCAATGGATGAAAATCCAAATGTGCATAGAGAACATGAGGACGCAGGTGCTCTATGTTATGAACCTCCCCGCTTTCCAAGCTTGGACATTCCTTTCTTAAGCTGTGATCTTATACAATCTGGGGGCGATATGCAGCAAGAATTCAGTCCCCTTGGTATCCGCCAATTTATGATGTCTTCTATGAATTGTCTAACTCCTTTTAGATTATGGGACTCACCTTCTCGGGATGATAGCCCAGATGTTTTGTTAAAAAGTGCAGCTAAAACCTTCACCGGTACACCATCTATATTAAAAAAACGAAACCGAGATCTTTTATCTCCACTATCAGATAAAAGAATTGACAAGAAACTTGAGATTGAAATGACATCAACCTTGATAAAAAACTTTTCTCGATTGGATGTCATGTTTGATGACAATGAGACTCAGGGAGCAGATTTGCTTCCTCTATCTTCAATGCCAAAAAGGGACTCTGGTACCTATGTTGAAGATGATAAAGAAAATTGTGGACAATTTGTGAAAGAGGAACCAGTTGTGGTAAAAAATAAGTCTGGTATTTTGGACGACAAAAAATCTGAAAAAGATTTAGGTGATGGTAATTCTAAGGACAAAATTAAGCAGCAAACTCTTGATGTTGACCCCGCGGTAGAGAATGATGGTAGTGCTGCTGCTGAGATTGTGCAACAACCATCCGGAGTTTTTGTTGAACATGATATAAATGACCTACTAATGTATTCACCAGATCAAGTAAATTTGAAATCAGAAAGAGTTCTTAGTTTAAGTGCTAGAACTAAAAAAAATCCACGCTCAAGGATTAATTCACCATCTGTTTGGTTAAAGGAGCACGAAAGACTTTCAGTTGCTGTTACTTGTATACAGTCTGTCAGTTCATCAGGTCCTGGCGAGAATTCGGGTGATCACATTGGAAACGATGGTGGTCTTGAAACATGTAGCATATTTGGTGGAACACCATTTAGGAAAAGCATTGAATCGCCTTCAGCATGGAAATCTCCTTGGTTCATCAACACTTTGTTGGGAAGCCCCCGGATTGATACTGAAATTACAATTGAGGATTTTGGGTATTTCATGAGCCCTGGTGACAGAAGCTTTGATGCAATCGGGCTGATGAAACAGATCAATGAACAAACTGCTGCTCAGTATGCCAGTGCTCATGAGATCTTAGGAAATGAAACTCCGAAGGCGTTAACCAAAGATAAATCCAGAAACGTTGGGGATGAAGACCGGGAAAATATTGATCCTAATAATCAGCATGGGAACCATTCTCAGTCGGATTCAAGTGCATTGGTGGAACGACGCGTGCTTGACTTTAGCGAATGTGGTACTCCGGTCAAAGGTGATAGTAGCAAATCCTTAGCTATGAGCTTCTCAAGCCCAACTTCATACTTGTTGAAGGGCTGTAGATAA 2973 0.4184 MEGERTIPAVDGVTDGVQKIRALHGRTTGPTRRSTKGQWTPEEDEILRKAVQRFKGKNWKKIAEGFKDRTDVQCLHRWQKVLNPELVKGPWSKEEDEIIIDMVNRYGPKKWSTIAQKLPGRIGKQCRERWHNHLNPTINKEAWTQEEELALIRAHQIYGNKWAELAKILPGRTDNAIKNHWNSSVKKKLDSYLASGLLTPSQNLPLAGNPNQPIASIASRLQQSGEDNGPRGGTEGEEVSQCSQESANAGYFSSAREMNSVALQSGEEYRPNEELSQASCSEPYYVSLDEVTASLTDMAGQEICTSQFVEQKYSHKPRNSNDGEDQLDLDDLTNISSLDFGHESSQFQNDCMMNVPFQTSVGLGVATTMRPTSMDPVKPEQMFMSDDECCRILFSEAISEECFSSEDFNKGVNMVDLLGGPSFLSLSSLPSAPSAVSSTGDRLMYTAEANRLVGSDDEQFVSRTQDNIIYASDLSSPCLNRIDSTEMQEPSDVVKDDSKLVPVNSFGCGSDAKQTSYPMDENPNVHREHEDAGALCYEPPRFPSLDIPFLSCDLIQSGGDMQQEFSPLGIRQFMMSSMNCLTPFRLWDSPSRDDSPDVLLKSAAKTFTGTPSILKKRNRDLLSPLSDKRIDKKLEIEMTSTLIKNFSRLDVMFDDNETQGADLLPLSSMPKRDSGTYVEDDKENCGQFVKEEPVVVKNKSGILDDKKSEKDLGDGNSKDKIKQQTLDVDPAVENDGSAAAEIVQQPSGVFVEHDINDLLMYSPDQVNLKSERVLSLSARTKKNPRSRINSPSVWLKEHERLSVAVTCIQSVSSSGPGENSGDHIGNDGGLETCSIFGGTPFRKSIESPSAWKSPWFINTLLGSPRIDTEITIEDFGYFMSPGDRSFDAIGLMKQINEQTAAQYASAHEILGNETPKALTKDKSRNVGDEDRENIDPNNQHGNHSQSDSSALVERRVLDFSECGTPVKGDSSKSLAMSFSSPTSYLLKGCR 990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00935 990 Gene3D - 141 203 - -
Spst9g00935 990 MobiDBLite consensus disorder prediction 912 950 - -
Spst9g00935 990 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 139 189 IPR017930 -
Spst9g00935 990 FunFam Transcriptional activator Myb isoform A 35 87 - -
Spst9g00935 990 Gene3D - 35 87 - -
Spst9g00935 990 FunFam Transcription factor MYB3R-2 141 203 - -
Spst9g00935 990 MobiDBLite consensus disorder prediction 914 937 - -
Spst9g00935 990 MobiDBLite consensus disorder prediction 222 248 - -
Spst9g00935 990 Pfam Myb-like DNA-binding domain 36 82 IPR001005 -
Spst9g00935 990 Pfam Myb-like DNA-binding domain 140 182 IPR001005 -
Spst9g00935 990 Pfam Myb-like DNA-binding domain 88 134 IPR001005 -
Spst9g00935 990 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 31 82 IPR017930 -
Spst9g00935 990 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 83 138 IPR017930 -
Spst9g00935 990 SUPERFAMILY Homeodomain-like 85 181 IPR009057 -
Spst9g00935 990 CDD SANT 142 182 IPR001005 -
Spst9g00935 990 ProSiteProfiles Myb-like domain profile. 31 82 IPR001005 -
Spst9g00935 990 Gene3D - 88 139 - -
Spst9g00935 990 ProSiteProfiles Myb-like domain profile. 135 185 IPR001005 -
Spst9g00935 990 MobiDBLite consensus disorder prediction 700 727 - -
Spst9g00935 990 SMART sant 35 84 IPR001005 -
Spst9g00935 990 SMART sant 139 187 IPR001005 -
Spst9g00935 990 SMART sant 87 136 IPR001005 -
Spst9g00935 990 CDD SANT 39 82 IPR001005 -
Spst9g00935 990 FunFam Transcriptional activator Myb isoform A 88 140 - -
Spst9g00935 990 CDD SANT 90 134 IPR001005 -
Spst9g00935 990 PANTHER MYB PROTEIN-RELATED 36 109 - -
Spst9g00935 990 MobiDBLite consensus disorder prediction 700 726 - -
Spst9g00935 990 SUPERFAMILY Homeodomain-like 37 92 IPR009057 -
Spst9g00935 990 ProSiteProfiles Myb-like domain profile. 83 134 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00935 Spst-Chr9 8244761 8251384 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00935 20 990 MYB Transcription Factor Family AT4G32730 43.810 0.0 740
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Spst9g00935 Myb_DNA-binding 4.9e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00935 - K09420 gmx:100811335 1686.77