Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00930 ATGCCTTTGCCACCGGCGGCGGTGACGACATCGACTGTTCCTGCACCACCTCTACCCCTTCCATTCACCACGGAACCAACCTTGGCAACGCCGTGGAGCCCCGCGCTGCCGTTATCGGAGCCGGAAGTGAATTTGCCGGTGGCTGTGGATTTTCGGAAGGCTTCAACGTTCCACGTGTCTAATGGGCTCATTGTTGGGCTTGTAGTTGGAGCAATCGTTTTCGTGTTTGTTTTCAGTGTTGGATTAGTTCTATGCAGGAATAGGAAGAAAAACAAACAGAAGAATCTATGCACGGGTCGCTCTAAGGAATCACCACCCTCTTTTAAATCCAAGGGATCTCAAGTTATTCGAGTGCCACCACATCTTACAGAAGACAGTGGAACTTCTGGTTCTTTTAATTCAGTCTCTGTGAAAGCAATTCCAAACCATGCTCCAAGGGCAACCTTTGGTCCCGTGAATGGTGGTTTCACGTATGATGAAATATTGGTGGCCACTAACTGTTTCTCTGAGTCCAACCTTCTTGGAGAAGGTGGCTTTGGCTATGTGTACAAAGGAGTTCTCCCATGTGGAAAACAAATTGCGGTTAAGCAGTTAAAATCAGGAAGCCAACAAGGAGAGAGAGAATTTCAAGCTGAGGTTGAGACAATTAGCCGAGTGCATCATAAACATCTTGTTGAATTGGTTGGATACTGCGTTACTGGGGCAGAGAGAATGCTTGTTTATGAATTTGTTCCAAATAACACATTGGAATTTCACTTGCATGGGGAGGGGGGGATCTTCTTAGGATGGACAACGAGAATTAAAATTGCCCTCGGATCTGCAAAAGGGCTGGCATATCTTCATGAAGATTGTAATCCAGCAATTATTCACCGTGATATCAAAGCATCTAATATTCTTCTTGATTTTAAGTTTGAACCCAAGGTTTCTGACTTTGGCTTGGCAAAAATCTTACCAGACACCGATGGTTGCATTAGTCACCTCACTACCCGAGTGATGGGAACCTTTGGATATCTGGCTCCAGAGTACGCATCAAGTGGTAAATTGACAGATAAATCAGATGTATATTCCTACGGCGTCATGCTTTTAGAACTTATAACCGGTCGTCCACCAATCACTGCAGCAGGATTAAGGAATGAGAGCTTGGTTGACTGGGCTAGGCCATTGCTTGCTCAAGCACTACAAGATGATGACTTCGACAACCTTGTTGATCCAAGGTTGCAGAAAAATTTCGATTCTGATGAGATGGTTAGACTCGTTACGTGTGCAGCTGCTTGTGTGCGCCATTCATCCAGACTTCGACCTCGTATGAGCCAAATTGTTGGAGCCTTAGAGGGAGTGGTTTCTCTAACCGACCTTGTTGGAGATGTTACACCGGGGCATACCACAATATACAATTGGTCAAATTATTTAGGTTATGATGCCAACCAATACCAGCAGAACATGAGAAGTTTTAACTTGGCATTATCATCTCAGAAATACAGCTCCAATGGGTACAGTGAAACCACCAGTGCTTATGGTCTTCACTCATCAGGTTCAAGTAGTGAGACTCACCAATCATTCCGAGACATATTATAG 1575 0.4476 MPLPPAAVTTSTVPAPPLPLPFTTEPTLATPWSPALPLSEPEVNLPVAVDFRKASTFHVSNGLIVGLVVGAIVFVFVFSVGLVLCRNRKKNKQKNLCTGRSKESPPSFKSKGSQVIRVPPHLTEDSGTSGSFNSVSVKAIPNHAPRATFGPVNGGFTYDEILVATNCFSESNLLGEGGFGYVYKGVLPCGKQIAVKQLKSGSQQGEREFQAEVETISRVHHKHLVELVGYCVTGAERMLVYEFVPNNTLEFHLHGEGGIFLGWTTRIKIALGSAKGLAYLHEDCNPAIIHRDIKASNILLDFKFEPKVSDFGLAKILPDTDGCISHLTTRVMGTFGYLAPEYASSGKLTDKSDVYSYGVMLLELITGRPPITAAGLRNESLVDWARPLLAQALQDDDFDNLVDPRLQKNFDSDEMVRLVTCAAACVRHSSRLRPRMSQIVGALEGVVSLTDLVGDVTPGHTTIYNWSNYLGYDANQYQQNMRSFNLALSSQKYSSNGYSETTSAYGLHSSGSSSETHQSFRDIL 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00930 524 MobiDBLite consensus disorder prediction 1 20 - -
Spst9g00930 524 Gene3D Transferase(Phosphotransferase) domain 1 244 452 - -
Spst9g00930 524 FunFam proline-rich receptor-like protein kinase PERK8 244 458 - -
Spst9g00930 524 CDD STKc_IRAK 174 445 - -
Spst9g00930 524 ProSitePatterns Serine/Threonine protein kinases active-site signature. 288 300 IPR008271 GO:0004672|GO:0006468
Spst9g00930 524 FunFam Proline-rich receptor-like protein kinase PERK8 141 243 - -
Spst9g00930 524 ProSitePatterns Protein kinases ATP-binding region signature. 174 196 IPR017441 GO:0005524
Spst9g00930 524 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 73 487 IPR047117 -
Spst9g00930 524 Gene3D Phosphorylase Kinase; domain 1 134 243 - -
Spst9g00930 524 ProSiteProfiles Protein kinase domain profile. 168 447 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g00930 524 SMART serkin_6 168 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g00930 524 MobiDBLite consensus disorder prediction 504 524 - -
Spst9g00930 524 SUPERFAMILY Protein kinase-like (PK-like) 149 443 IPR011009 -
Spst9g00930 524 MobiDBLite consensus disorder prediction 94 130 - -
Spst9g00930 524 Pfam Protein kinase domain 169 436 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00930 Spst-Chr9 8170401 8173568 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00930 63 515 Trihelix Transcription Factor Family AT5G38560 50.324 5.99e-148 438
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Spst9g00930 Pkinase 1.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00930 - - gmx:100810262 798.89