Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00929 ATGGAAAGGGAACGTACAAGGAAACGCCCTCGTCTCGCATGGGACGTGGCCCCTCCCTCAATGCCTGAGGCTCAACTGGCTTTGCCGGTACATGGTGACGAAGGAATTGAAAGAAAGCATGTTTCACCTCCGAGACGGGACGACGATCGCGAAGGACATTATGTCTTCAATCTTGGCGAAAATCTCACTCCTAGATATAAAATCCTCGGCAAGATGGGTGAAGGCACATTTGGTCGGGTATTGGAATGTTGGGACCGCCAAACTAGAGAATATGTGGCTATCAAGGTAGTTAGAAGCATACGGAAATATCGAGATGCAGCTATGCTTGAGGTTGATGTGCTTCAACATCTAGCGAAGAATGATAGAGGAAACTCACGATGTGTGCAGATCCGAGATTGGTTTGATTACCGAAATCACATATGCATTGTCTTTGAGAAGCTTGGACCAAGCTTATTTGATTTTCTAAAGAGAAATAAATACTGCCCATTCCCTGTGGATCTTGTTCGGGAATTTGGACGACAGCTTTTGGAATCTGTAGCATATATGCATGAACTACGCCTAATCCACACTGACCTGAAGCCAGAAAATATACTTCTAGTTTCTTCTGAATATGTAAAGCTCCCTAGCTATAAGAGAGTTTCCTCAGATGAAACGCAGTTCAGATGCTTGCCCAAGTCTAGTGCTATTAAGCTGATTGATTTTGGTAGTACTGCATATGATAATCAGAATCATAGCTCCATTGTTTCTACAAGGCATTACAGAGCCCCTGAGATTATACTAGGTCTAGGCTGGTCATATCCATGTGATCTGTGGAGTGTTGGATGTATTCTAATCGAACTATGCTCGGGTGAAGCATTGTTTCAGACTCATGAAAACTTGGAGCACCTGGCAATGATGGAGAGAGTTTTGGGACCTATTCCGGAGCCCATGATCCGAAGGTGCAATAAGGGTGCAGAAAAGTATTTTAAGCGTGGATCTCGACTAAGATGGCCTGAAGGAGCAGTTTCAAGGGAGAGCATCAATGCAGTGAAGAAGCTCGGTCATCTGAAGGATATTGTATCTCGAAGTGTGGACTCTTCAAGGTCCTCCTTAACTAACTTGTTACATGGCTTATTATCATATGACCCAACCAAACGTCTAACAGCTCGTCAAGCCCTCGATCATCCTTTCTTTAGGAATCCAACTTGA 1188 0.4411 MERERTRKRPRLAWDVAPPSMPEAQLALPVHGDEGIERKHVSPPRRDDDREGHYVFNLGENLTPRYKILGKMGEGTFGRVLECWDRQTREYVAIKVVRSIRKYRDAAMLEVDVLQHLAKNDRGNSRCVQIRDWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHELRLIHTDLKPENILLVSSEYVKLPSYKRVSSDETQFRCLPKSSAIKLIDFGSTAYDNQNHSSIVSTRHYRAPEIILGLGWSYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPIPEPMIRRCNKGAEKYFKRGSRLRWPEGAVSRESINAVKKLGHLKDIVSRSVDSSRSSLTNLLHGLLSYDPTKRLTARQALDHPFFRNPT 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00929 395 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 37 393 - -
Spst9g00929 395 FunFam Serine/threonine-protein kinase AFC2 53 146 - -
Spst9g00929 395 SUPERFAMILY Protein kinase-like (PK-like) 53 393 IPR011009 -
Spst9g00929 395 SMART serkin_6 66 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g00929 395 CDD PKc_CLK 53 391 - -
Spst9g00929 395 Gene3D Transferase(Phosphotransferase) domain 1 120 391 - -
Spst9g00929 395 Gene3D Phosphorylase Kinase; domain 1 53 146 - -
Spst9g00929 395 ProSiteProfiles Protein kinase domain profile. 66 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g00929 395 MobiDBLite consensus disorder prediction 32 51 - -
Spst9g00929 395 ProSitePatterns Serine/Threonine protein kinases active-site signature. 187 199 IPR008271 GO:0004672|GO:0006468
Spst9g00929 395 FunFam Serine/threonine-protein kinase AFC2 142 391 - -
Spst9g00929 395 Pfam Protein kinase domain 66 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g00929 395 MobiDBLite consensus disorder prediction 29 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00929 Spst-Chr9 8156966 8160282 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00929 65 393 Core Cell Cycle Gene Families AT3G48750 26.786 1.43e-27 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Spst9g00929 Pkinase 2.4e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00929 K08287 - gmx:100782453 764.607