Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00906 ATGTGTGCTGCTAGATCTTCGGGGCTTTTACCAGCTTGGACTGGGATGATTGTTAGAATATTTGAACATTGCACAGAGCAGCATCAAAAGCGTGCGCTCTCTCTCTTTCTCTCCGCCCACGTGCTGGCTGCGTCTCAACAATCACTCACGCCGTCGTCGGTTTTCTCCGCCCACGGCTGCTTCCAACGGATGGCCACCACGGAGTCCGATCACGATTACGACTTTCCGAATCTCGATTACGACCTCCGCTATCTGAGCCTCGCCGGAACCGATGCCTTCGCCGCCTTCCAAAATCTATTACCGGATTCTATCACTTCATTTTCAACTTGTGGACTGACAGACCCTTTTTCTTCCCAAAACCTCACTCCCAAGCATTCCACCATCACTGCCACAATTGATTCTCAGTCATCCATTTGTGGCACTGCTAATGTTGGTAGTCCAGTGTCAGCTAATAAACCAGAGGGCAGAAAGAATCATACGAAAGGAGCCACAAGTGGTTCCTCTGAGCCATCTGATGAAGATGATGAAGCAGGTCCTTGTGAACATAGCACAAATGCAGTTGATATGAAGCGTCTTAGAAGGAAGGTTTCTAATCGCGATTCTGCCAGAAGGTCAAGAAGAAGAAAACAAGCGCAGTTGGCTGACCTAGAGCTGCAGGTTGAAAAACTGAAAGTGGAAAATGCAACCCTGTACAAGCAGTTCAATGATGCTAGTCAACATTTTCGCGAGGCTGATACGAACAACCGGGTGCTAAAATCAGACGTAGAAGCCTTGAGAGCTAAGGTGAAGTTAGCAGAAGACATGGTGACTAGGGGCTCTTTCACTACGTTAAACAATCAGCTTCTTCCCACACAGTGTCAAATGAGCACGCCCCCGCCGCTAAACACGACTAATCTGCGCCACATGGCACATGTTTCGCCAACCATCACTGTGCATGGAAATGATGGCTCATACAATGGTGCCACAGTTTGTGGACAGAATTCAGACCTTGGAAACTTGGACATGTGTTTCAACGGCATGAACAATGTGAATGGAGTTATGAGCGATGGCATGAGTTGTGGGACAACTTCTGCACAACCTATTGCAATATTACTCTGCATGATTAAATTTTATGCACATTTATATGCTTTCTATTACTGCTTCTATGCCAGAACTATTCATGAGTGA 1167 0.4679 MCAARSSGLLPAWTGMIVRIFEHCTEQHQKRALSLFLSAHVLAASQQSLTPSSVFSAHGCFQRMATTESDHDYDFPNLDYDLRYLSLAGTDAFAAFQNLLPDSITSFSTCGLTDPFSSQNLTPKHSTITATIDSQSSICGTANVGSPVSANKPEGRKNHTKGATSGSSEPSDEDDEAGPCEHSTNAVDMKRLRRKVSNRDSARRSRRRKQAQLADLELQVEKLKVENATLYKQFNDASQHFREADTNNRVLKSDVEALRAKVKLAEDMVTRGSFTTLNNQLLPTQCQMSTPPPLNTTNLRHMAHVSPTITVHGNDGSYNGATVCGQNSDLGNLDMCFNGMNNVNGVMSDGMSCGTTSAQPIAILLCMIKFYAHLYAFYYCFYARTIHE 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00906 388 Coils Coil 248 268 - -
Spst9g00906 388 SUPERFAMILY Leucine zipper domain 189 240 IPR046347 GO:0003700|GO:0006355
Spst9g00906 388 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 188 251 IPR004827 GO:0003700|GO:0006355
Spst9g00906 388 MobiDBLite consensus disorder prediction 143 187 - -
Spst9g00906 388 CDD bZIP_plant_GBF1 207 242 IPR045314 GO:0003700|GO:0006355
Spst9g00906 388 Gene3D - 189 246 - -
Spst9g00906 388 Coils Coil 199 233 - -
Spst9g00906 388 PANTHER BASIC LEUCINE ZIPPER 63 116 347 - -
Spst9g00906 388 SMART brlzneu 186 250 IPR004827 GO:0003700|GO:0006355
Spst9g00906 388 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 193 208 IPR004827 GO:0003700|GO:0006355
Spst9g00906 388 FunFam BZIP transcription factor 188 239 - -
Spst9g00906 388 Pfam bZIP transcription factor 189 237 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00906 Spst-Chr9 7917771 7928727 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00906 133 333 bZIP Transcription Factor Family AT5G24800 52.913 3.99e-60 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Spst9g00906 bZIP_1 3.9e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00906 K25784 - gmx:780555 444.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00906 9 7917771 7928727 Spst9g00906 9 7917771 7928727 ECH
Spst9g00906 9 7917771 7928727 Spst8g01766 8 21247291 21251360 PCT