Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00903 ATGTCCATGGATCCTTCTAAGAAACCTAACAAGATCAGAGAAATTGTGAGGCTTCAACAGCTTCTTAAGAGATGGAGAAGGGTGGCAAACTCTTCAAAAACAAGCAGAAGTAACAACAACAGCAACAGCAACACCAGCAGAAGCATCAAATTTCTCAAAAGAACACTTTCTCTGTCTGAACGTGAGGGAGGAGGATCGGGCAGTGTTGTTCCCAAGGGCTACGTTGCTGTTTGTGTTGGTGTGGACCTTAGCAGATTCGTTATACCAACCGAGTATTTGGGTCACCAAGCCTTTCACATGCTACTCAGAGAAGCCGAGGAAGAGTTTGGGTTTGAACAAACTGGGGTTCTCAGAATTCCTTGTGAAGTGTCCTTGTTCGAGAGTATCTTGAAGATAGTGGAGAGAAAGGACAAGTTTTTCACTCAGAAATGCAGATTTAGCATCGAGAAAATGATGGGATACTGCTCCTCCAACCACCTTGCTTATTCTCATCAACCTCAAAGTCCAATGTGCAGATAG 519 0.4393 MSMDPSKKPNKIREIVRLQQLLKRWRRVANSSKTSRSNNNSNSNTSRSIKFLKRTLSLSEREGGGSGSVVPKGYVAVCVGVDLSRFVIPTEYLGHQAFHMLLREAEEEFGFEQTGVLRIPCEVSLFESILKIVERKDKFFTQKCRFSIEKMMGYCSSNHLAYSHQPQSPMCR 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00903 172 MobiDBLite consensus disorder prediction 27 46 - -
Spst9g00903 172 Pfam Auxin responsive protein 23 132 IPR003676 GO:0009733
Spst9g00903 172 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 44 129 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00903 Spst-Chr9 7900989 7901507 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00903 6 172 Calmodulin-binding Proteins AT4G31320 52.308 5.16e-57 175
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00903 9 7900989 7901507 Spst9g00903 9 7900989 7901507 ECH
Spst9g00903 9 7900989 7901507 Spst8g01763 8 21199162 21199683 PCT