Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00897 ATGGCGCATGAACTACAATACTGCTGTCTTCTCACGCTCTTCACTTGTTTTTTGCCTTCATTGGCTGACAATGCTCAAGTTCTGATGAACTTCAAAAGCTTCTTGTCCAATGCTGATGCTTTAAGTAACTGGGGGAACCAAACAATTGGTGTGTGCAGCTGGACTGGTATATTATGTTTCAATCAAAATTTTCATGGCTTGAGATTAGAACACATGGGACTAGGTGGCACCGTTAACGTAGACACGTTGCTTCAGTTGTCCAATTTGAACAGCTTTAGTGTCATTAACAACAACTTTGAGGGTCCAATGCCTGAATTCAAGAAGCTTGTGAATTTAAGGGCGATGTTTCTGAGCAATAACAAGTTCTCTGGTGAAATTCCAGATGATGCTTTTGAAGGCATGAGGCGTCTTAAGAGAGTATTCTTGGCTGAAAATGGGTTCACGGGTCATATTCCTACATCCCTTGTTAAATTGCCTAAACTTTTGGATGTGGATATACATGGAAATAGTTTTGATGGCAACATACCAGAATTTCAACAGAGGGATTTCAGAGTGTTTAATTTGTCTTACAACAATTTAGAGGGTCCAATACCAGAAAGCTTAAGCGGCATGGATCCCGGCTCATTTGCTGGCAATAATGGTCTATGTGGAAAGCCTCTAAGCCTCTGCACTGGAAGCCCCACCCCACCCCCGGTCTCTAATCAACACCCGGATTCACATGCAGAAAAAGAAAACACGAAAAAACGCATTCTTCTAGCAGTTATTATAGTGGTGGTGGTGATAGTGTTGGCTTCATTACTAGCACTCCTGTTCATCCGTTACCGTCGAAAGAGAGCCATACTGGTCAAAGATGCACAACCCCAGAACGTTACTCCATTTTCTAGCGAGTCCAAATCCATTGTTGTGACAGCTGAATCCAAGAAAAGTGAAGATGGAGAGTTGAACTTCGTTGGGAACGATAGGGTGGGGATTGACTTGCAAGAATTGCTAAGGGCCTCGGCTGAGGTTCTGGGGAGTGGCAGTTTTGGATCCACGTACAAGGCCATGCTTCTGAACGGGCCAGTGGTGGTGGTGAAGAGATTCAAGCACATGAATAACGTGGGGAAGAAAGAGTTTTTTGAGCATATGAACAGACTTGGAAGATTGTCACACCCCAATCTACTTCCTCTGATTGCATTCTACTATGGAAAAGAAGAGAAGCTTTTGGTTCACGACTTTGCTGAAAATGGCAGCCTGGCCAGTCATCTTCATGGAAGAAATGGTGGTGGGTTGAACTGGGCAACTCGTTTGAAGGTCATAAAAGGAGTGGCCAGGGGGTTGGCTTATCTTTACACAGAGTTCCCCGACCAAGCTTTACCACACGGTCATCTAAAATCGTCAAACGTTGTATTGGACGGTTCCTTCGAGGCTCGTTTGGCAGAATACGGACTTGTGCCAGTGGTGGAAAAGAGCCATGCTCAGCAGTTCATGGTGGCCTACAAATCTCCAGAGGCGAGCCAGTTGGAGAGGCCGAGCGAGAAGAGCGATATCTGGTGTCTGGGGATTCTGATACTGGAGCTTTTAACGGGGAAGTTCCCTGCGAATTATCTGAGGCATGGGAAGGGAGCGAGTGAGGATTTGGCGGCGTGGGTGAACTCGATAGTGACGGAAGGGTGGAGTGGGGAGGTGCTTGATAAGGGGATTCCTGGGAGAGGGAGTGGAGAGGGTGAGATGGTGAAGCTGCTGAGGATTGGAATGGGGTGCTGTGAATGGAGCTTGGAGAGTAGGTGGGGTTGGAAGGAGGCTGTGGCAAAGATTGAGGAGTTGAAGGAGAGTGATCGTGATGGTGATGTTGAAGGTGGAAGTGATGGTGATCTTTTGTACTCATTGTCAACCAGTCTCGATGACTTCTCTCTCTCTCACTCTGTTTCATGA 1914 0.4645 MAHELQYCCLLTLFTCFLPSLADNAQVLMNFKSFLSNADALSNWGNQTIGVCSWTGILCFNQNFHGLRLEHMGLGGTVNVDTLLQLSNLNSFSVINNNFEGPMPEFKKLVNLRAMFLSNNKFSGEIPDDAFEGMRRLKRVFLAENGFTGHIPTSLVKLPKLLDVDIHGNSFDGNIPEFQQRDFRVFNLSYNNLEGPIPESLSGMDPGSFAGNNGLCGKPLSLCTGSPTPPPVSNQHPDSHAEKENTKKRILLAVIIVVVVIVLASLLALLFIRYRRKRAILVKDAQPQNVTPFSSESKSIVVTAESKKSEDGELNFVGNDRVGIDLQELLRASAEVLGSGSFGSTYKAMLLNGPVVVVKRFKHMNNVGKKEFFEHMNRLGRLSHPNLLPLIAFYYGKEEKLLVHDFAENGSLASHLHGRNGGGLNWATRLKVIKGVARGLAYLYTEFPDQALPHGHLKSSNVVLDGSFEARLAEYGLVPVVEKSHAQQFMVAYKSPEASQLERPSEKSDIWCLGILILELLTGKFPANYLRHGKGASEDLAAWVNSIVTEGWSGEVLDKGIPGRGSGEGEMVKLLRIGMGCCEWSLESRWGWKEAVAKIEELKESDRDGDVEGGSDGDLLYSLSTSLDDFSLSHSVS 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00897 637 Gene3D Phosphorylase Kinase; domain 1 296 406 - -
Spst9g00897 637 ProSitePatterns Protein kinases ATP-binding region signature. 337 359 IPR017441 GO:0005524
Spst9g00897 637 Gene3D Transferase(Phosphotransferase) domain 1 407 616 - -
Spst9g00897 637 Gene3D Ribonuclease Inhibitor 182 224 IPR032675 -
Spst9g00897 637 ProSiteProfiles Protein kinase domain profile. 331 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g00897 637 Pfam Protein kinase domain 334 534 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g00897 637 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 10 606 IPR046959 -
Spst9g00897 637 Pfam Leucine rich repeat 111 170 IPR001611 GO:0005515
Spst9g00897 637 Pfam Leucine rich repeat N-terminal domain 23 59 IPR013210 -
Spst9g00897 637 SUPERFAMILY Protein kinase-like (PK-like) 335 601 IPR011009 -
Spst9g00897 637 Gene3D Ribonuclease Inhibitor 22 181 IPR032675 -
Spst9g00897 637 SUPERFAMILY L domain-like 24 204 - -
Spst9g00897 637 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 80 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00897 Spst-Chr9 7868341 7870863 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00897 9 610 Receptor kinase-like Gene Family AT5G35390 45.295 0.0 528
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Spst9g00897 Pkinase 2.1e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00897 - - gmx:100803999 976.852