Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00893 ATGGTTCTCCTCCTAGGAGCATGCCCAGAATATGGATGTCTAGTGTATGAATACATGGCAAATGGAAGCTTGGACGATTGCCTATTTCGACAAGGAAACGCTCCCTCGCTTCCTTGGCAGCTAAGGTTCAGGATAGCAGCTGAAATAGGCACAGGCTTACTGTTCCTGCACCAGACAAAACCAGAACCACTGGTGCACAGGGACTTGAAACCAGCAAATATCTTGCTTGACAGAAACTTTGTGGCGAAAATCAGTGATGTAGGTTTGGCCAGGCTAGTTCCACCATCTGTGGCAGACACAGTCACGCAATATCACATGACAGCCACAGCAGGAACCTTCTGCTACATAGATCCTGAGTACCAGCAGACAGGGATGTTGGGCGTGAAATCAGACATATACTCCCTTGGGATCATCTTTTTGCAAATTTTGACAGCAAAATCACCAATGGGTTTGACCCATCATGTTGGAAGGGCCATTGAGAAGGGAACTTTAGATGAGATGTTGGATCCATCAGTGCCTGATTGGCCACAAGAGGATGCCTTGAAATTTGCTAAGATGGCAGTGCAGTGTGCTGAATTAAGGCGCAAAGACAGACCTGATCTGGGCAAAGTTATCCTACCAGAACTCAACAGACTTAGAGACCTTGCTGAAGATAATAATCTTATTTCAGCTTTGGGTAACCTCCCTCCAAATATGCCCCGTGACAAACAAGTTTCTGTAGTACTGGATGGAGTGTGTCCTCCATTTCCTCACTCGGTTTCGGGGGAAAGTAGAGAAAACAATTCAGTGGCTTTCTGA 798 0.4624 MVLLLGACPEYGCLVYEYMANGSLDDCLFRQGNAPSLPWQLRFRIAAEIGTGLLFLHQTKPEPLVHRDLKPANILLDRNFVAKISDVGLARLVPPSVADTVTQYHMTATAGTFCYIDPEYQQTGMLGVKSDIYSLGIIFLQILTAKSPMGLTHHVGRAIEKGTLDEMLDPSVPDWPQEDALKFAKMAVQCAELRRKDRPDLGKVILPELNRLRDLAEDNNLISALGNLPPNMPRDKQVSVVLDGVCPPFPHSVSGESRENNSVAF 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00893 265 Pfam Protein kinase domain 11 200 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g00893 265 ProSitePatterns Serine/Threonine protein kinases active-site signature. 64 76 IPR008271 GO:0004672|GO:0006468
Spst9g00893 265 ProSiteProfiles Protein kinase domain profile. 1 209 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g00893 265 SMART serkin_6 1 209 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g00893 265 Gene3D Transferase(Phosphotransferase) domain 1 1 226 - -
Spst9g00893 265 FunFam U-box domain-containing protein 51 19 219 - -
Spst9g00893 265 SUPERFAMILY Protein kinase-like (PK-like) 4 204 IPR011009 -
Spst9g00893 265 PANTHER OS02G0152300 PROTEIN 1 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00893 Spst-Chr9 7845741 7846796 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00893 1 219 Receptor kinase-like Gene Family AT5G35380 81.735 1.49e-127 377
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Spst9g00893 Pkinase 1.4e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00893 - - gmx:100803867 444.506